Detailed information of RPACG24853.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG24853.1DEATH EFFECTOR DOMAIN-CONTAINING PROTEINtig00116312882804889933+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01335DEDDeath effector domainDomainInterproscan
PF20694TRADD-like_NTRADD-like N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001875DomainDeath effector domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR038856FamilyDeath effector domain-containing proteinInterproscan
IPR049341DomainTRADD-like N-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15205DEATH EFFECTOR DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006915Biological Processapoptotic processInterproscan
GO:0008625Biological Processextrinsic apoptotic signaling pathway via death domain receptorsInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG24853.1 global RNA-seq network
TOP