Detailed information of RPACG24757.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG24757.1NUCLEOLAR RNA-ASSOCIATED PROTEINtig00116300985158986507+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF03813NrapNrap protein domain 1DomainInterproscan
PF17403Nrap_D2Nrap protein PAP/OAS-like domainDomainInterproscan
PF17404Nrap_D3Nrap protein domain 3DomainInterproscan
PF17405Nrap_D4Nrap protein nucleotidyltransferase domain 4DomainInterproscan
PF17406Nrap_D5Nrap protein PAP/OAS1-like domain 5DomainInterproscan
PF17407Nrap_D6Nrap protein domain 6DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR005554FamilyNOL6/Upt22Interproscan
IPR035082DomainNrap protein domain 1Interproscan
IPR035367DomainNrap protein, domain 2Interproscan
IPR035368DomainNrap protein, domain 3Interproscan
IPR035369DomainNrap protein, domain 4Interproscan
IPR035370DomainNrap protein, domain 5Interproscan
IPR035371DomainNrap protein, domain 6Interproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0006409Biological ProcesstRNA export from nucleusInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0032545Cellular ComponentCURI complexInterproscan
GO:0034456Cellular ComponentUTP-C complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for RPACG24757.1 global RNA-seq network
TOP