Detailed information of RPACG24134.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG24134.1GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEINtig0011600020778552101547+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00790VHSVHS domainRepeatInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan
PF02883Alpha_adaptinC2Adaptin C-terminal domainDomainInterproscan
PF03127GATGAT domainDomainInterproscan
PF18308GGA_N-GATN-terminal extension of GAT domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002014DomainVHS domainInterproscan
IPR004152DomainGAT domainInterproscan
IPR008152DomainClathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainInterproscan
IPR008153DomainGamma-adaptin ear (GAE) domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013041Homologous_superfamilyClathrin adaptor, appendage, Ig-like subdomain superfamilyInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR027422FamilyADP-ribosylation factor-binding protein GGA1-3Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR038425Homologous_superfamilyGAT domain superfamilyInterproscan
IPR041198DomainN-terminal extension of GAT domainInterproscan
IPR047201DomainERI-1-like, DEDDh 3'-5' exonuclease domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45905GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005802Cellular Componenttrans-Golgi networkInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0034394Biological Processprotein localization to cell surfaceInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG24134.1 global RNA-seq network
TOP