Gene detail

Detailed information of RPACG23944.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG23944.1	INOSITOL POLYPHOSPHATE KINASE	tig00035475	460614	479578	-

Gene Structure

More details in Jbrowse Sequence

CDS

RPACG23944.1

AGGTCGACAAAGGGAGACATGGCTCGCCTAGTAAAAATATCGTCAAAGCTTGCAAATGGTGCCAATTACTGCCAGGGGGCGTCATGGGTCCGACACGTGGCTGGTGCTCGCAGTATCCACGTACAGACGACCGCGGACCGCGGAGAGGCCAAACACAGCACAGGCTCACAGATAACGCAGCACTACCCCATTATTGATCACACCTATGATGCTGTGGTCGTCGGGGCGGGAGGTGCCGGCCTTAGGGCTGCCTTCGGTCTGGCCAGCAAGGGCTTCAAGACTGCCTGTGTTACCAAGCTCTTCCCCACGAGGTCGCACACCATCGCTGCTCAGGGTGGAATCAATGCTGCGCTGTCAAGTGTGGATGATGACAAGTGGCAGTACCACTTCTACGACACTGTGAAAGGCTCTGACTGGCTGGGCGACCAGAACGCTATCCACTACTTGTGTGAGGAAGCGCCCAAGGCCGTCCTGGAGCTGGAGAACTATGGGATGCCATTCTCTCGCATGCCCGACGGCAGGATCTACCAGCGAGCCTTCGGTGGCCAGAGTCTCAAGTATGGCGAGGGTGGACAGGCTCACAGGGCTTGTGCTGTCGCTGACCGCACAGGACACTCCATGTTGCACACCCTCTACGGCAGGTCTCTCTTTTACGATGCTGACTATTTCGTTGAGTACTTTGCACTCGACTTGATCATGAATCAGGGCCGATGCGTCGGTGTCATGGCTCTGAGTCTTGAGGACGGCAATTTGCATCGCTTCAATGCCACAAACACTATCATTGCAACGGGTGGATTCGGCCGAACGTACTTCTCTTGCACCGGAGCTCACACCTGCACTGGTGATGGCGCTGGACTCGTGGCCCGCGCTGGACTCCCGCTCGAGGACATGGAGTTCATTCAGTTCCATCCGACTGGTATCTACGGTGCCGGCTGCCTTATCACGGAGGGTTGCCGTGGGGAGGGCGGTTACCTCGTGAACAGTGAGGGCGAACGATTCATGGAGCGCTACGCACCAAGTGCCAAGGATCTTGCATCTCGGGACGTAGTCTCACGAGCCATGACCATGGAAATGCGTGAGGGAAGGGGTGTTGGGGAACTGAAGGACCACATCTACCTGCAGCTGTCCCATCTTCCACCCGAGCAGCTCTTCTCGAAGTTGCCTGGCATCTCGGAGACAGCGCAGGTGTTTGCGGGTGTTGACGTCACCCGTGACCCAATCCCAGTCCTTCCCACGGTGCACTACAACATGGGAGGCATTCCCTGCAACTACATGGGACAGGTGATTGAGCACAAGAACGGCAAGGATGTCATTGTGCCAGGTCTGTTTGCTGCGGGAGAGGCTAGCTGCATGTCTGTCCACGGAGCAAACCGCCTCGGAGCAAACTCGCTGCTTGATCTCGTCATTTTCGGACGTGCCATCGCCAACATCATCGAAGAACAACACAAACCCGGCGAGAAAGTACCCGACCTGCCCCAGAATGCAGGAGAAATGAGTGTGGATCACATAGAGACTCTGCTCAACAACAAGGGAAATATGCCAACAGCTGACCTGCGTCTGAAACTGCAGAAGGCGATGCACGAGAACGCAGCCGTGTTCCGTGATGGCCCAACGCTTCAGACGGCCGTCAGAAAAGTGAAGGAAATTTGGCCTGAAATAATGCGTGAGATCAAGTTGTCAGACAAGGGTCGTGTGTGGAACAGTGACTTGGTTGAAGCACTCGAACTGCAGAACCTCATCATCAACGCCATGGCAACTGTTACCGGCGCCGAGAATCGTAAGGAGAGTCGTGGCGCACACGCCCGTGAAGACTTCCCGAAACGAATTGATGAGTTTGACTACAGCAAGCCACTTGATGGTCAGAAGAAGGTTCCGATTGAGCAGCATTGGCGCAAACATACCATGGCCTATGTGAACGTAGAAAGTGGCGATGTGAAACTTGACTACAGACCTGTCATCGATACAGTGCTTGATGACACCAAAGTTCAGAGTATCCCACCAAAGATCCGATCTTATTGA

Transcript

RPACG23944.1

CAAGGTCGACAAAGGGAGACATGGCTCGCCTAGTAAAAATATCGTCAAAGCTTGCAAATGGTGCCAATTACTGCCAGGGGGCGTCATGGGTCCGACACGTGGCTGGTGCTCGCAGTATCCACGTACAGACGACCGCGGACCGCGGAGAGGCCAAACACAGCACAGGCTCACAGATAACGCAGCACTACCCCATTATTGATCACACCTATGATGCTGTGGTCGTCGGGGCGGGAGGTGCCGGCCTTAGGGCTGCCTTCGGTCTGGCCAGCAAGGGCTTCAAGACTGCCTGTGTTACCAAGCTCTTCCCCACGAGGTCGCACACCATCGCTGCTCAGGGTGGAATCAATGCTGCGCTGTCAAGTGTGGATGATGACAAGTGGCAGTACCACTTCTACGACACTGTGAAAGGCTCTGACTGGCTGGGCGACCAGAACGCTATCCACTACTTGTGTGAGGAAGCGCCCAAGGCCGTCCTGGAGCTGGAGAACTATGGGATGCCATTCTCTCGCATGCCCGACGGCAGGATCTACCAGCGAGCCTTCGGTGGCCAGAGTCTCAAGTATGGCGAGGGTGGACAGGCTCACAGGGCTTGTGCTGTCGCTGACCGCACAGGACACTCCATGTTGCACACCCTCTACGGCAGGTCTCTCTTTTACGATGCTGACTATTTCGTTGAGTACTTTGCACTCGACTTGATCATGAATCAGGGCCGATGCGTCGGTGTCATGGCTCTGAGTCTTGAGGACGGCAATTTGCATCGCTTCAATGCCACAAACACTATCATTGCAACGGGTGGATTCGGCCGAACGTACTTCTCTTGCACCGGAGCTCACACCTGCACTGGTGATGGCGCTGGACTCGTGGCCCGCGCTGGACTCCCGCTCGAGGACATGGAGTTCATTCAGTTCCATCCGACTGGTATCTACGGTGCCGGCTGCCTTATCACGGAGGGTTGCCGTGGGGAGGGCGGTTACCTCGTGAACAGTGAGGGCGAACGATTCATGGAGCGCTACGCACCAAGTGCCAAGGATCTTGCATCTCGGGACGTAGTCTCACGAGCCATGACCATGGAAATGCGTGAGGGAAGGGGTGTTGGGGAACTGAAGGACCACATCTACCTGCAGCTGTCCCATCTTCCACCCGAGCAGCTCTTCTCGAAGTTGCCTGGCATCTCGGAGACAGCGCAGGTGTTTGCGGGTGTTGACGTCACCCGTGACCCAATCCCAGTCCTTCCCACGGTGCACTACAACATGGGAGGCATTCCCTGCAACTACATGGGACAGGTGATTGAGCACAAGAACGGCAAGGATGTCATTGTGCCAGGTCTGTTTGCTGCGGGAGAGGCTAGCTGCATGTCTGTCCACGGAGCAAACCGCCTCGGAGCAAACTCGCTGCTTGATCTCGTCATTTTCGGACGTGCCATCGCCAACATCATCGAAGAACAACACAAACCCGGCGAGAAAGTACCCGACCTGCCCCAGAATGCAGGAGAAATGAGTGTGGATCACATAGAGACTCTGCTCAACAACAAGGGAAATATGCCAACAGCTGACCTGCGTCTGAAACTGCAGAAGGCGATGCACGAGAACGCAGCCGTGTTCCGTGATGGCCCAACGCTTCAGACGGCCGTCAGAAAAGTGAAGGAAATTTGGCCTGAAATAATGCGTGAGATCAAGTTGTCAGACAAGGGTCGTGTGTGGAACAGTGACTTGGTTGAAGCACTCGAACTGCAGAACCTCATCATCAACGCCATGGCAACTGTTACCGGCGCCGAGAATCGTAAGGAGAGTCGTGGCGCACACGCCCGTGAAGACTTCCCGAAACGAATTGATGAGTTTGACTACAGCAAGCCACTTGATGGTCAGAAGAAGGTTCCGATTGAGCAGCATTGGCGCAAACATACCATGGCCTATGTGAACGTAGAAAGTGGCGATGTGAAACTTGACTACAGACCTGTCATCGATACAGTGCTTGATGACACCAAAGTTCAGAGTATCCCACCAAAGATCCGATCTTATTGATCTACCATCGCCATATCAACAATGCCTGCTTTTTGGGCCCCAGAAGGCAGTTTTGTTGTGTCAGTGAGTGCGGACTAGCTGTCTTGCCATCATTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03770	IPK	Inositol polyphosphate kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005522	Family	Inositol polyphosphate kinase	Interproscan
IPR038286	Homologous_superfamily	Inositol polyphosphate kinase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12400	INOSITOL POLYPHOSPHATE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008440	Molecular Function	inositol-1,4,5-trisphosphate 3-kinase activity	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0032958	Biological Process	inositol phosphate biosynthetic process	Interproscan
GO:0051765	Molecular Function	inositol tetrakisphosphate kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG23944.1 global RNA-seq network