| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG23847.1 | RHOMBOID-RELATED PROTEIN | tig00035469 | 4977727 | 4985537 | - |
| CDS | |||||
| RPACG23847.1 | |||||
| Transcript |
| RPACG23847.1 |
| Protein |
| RPACG23847.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01694 | Rhomboid | Rhomboid family | Family | Interproscan |
| PF10354 | BMT5-like | rRNA (uridine-N3-)-methyltransferase BTM5-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005121 | Domain | Ferrodoxin-fold anticodon-binding domain | Interproscan |
| IPR019446 | Domain | 25S rRNA (uridine-N(3))-methyltransferase BMT5-like | Interproscan |
| IPR022764 | Domain | Peptidase S54, rhomboid domain | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR035952 | Homologous_superfamily | Rhomboid-like superfamily | Interproscan |
| IPR036690 | Homologous_superfamily | Ferrodoxin-fold anticodon-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43066 | RHOMBOID-RELATED PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0070042 | Molecular Function | rRNA (uridine-N3-)-methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG23847.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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