| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG23814.1 | NOTCH LIGAND FAMILY MEMBER | tig00035469 | 4079042 | 4089516 | - |
| CDS | |||||
| RPACG23814.1 | |||||
| Transcript |
| RPACG23814.1 |
| Protein |
| RPACG23814.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00058 | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| PF06119 | NIDO | Nidogen-like | Family | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF12661 | hEGF | Human growth factor-like EGF | Domain | Interproscan |
| PF12662 | cEGF | Complement Clr-like EGF-like | Domain | Interproscan |
| PF14670 | FXa_inhibition | Coagulation Factor Xa inhibitory site | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000033 | Repeat | LDLR class B repeat | Interproscan |
| IPR000082 | Domain | SEA domain | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000859 | Domain | CUB domain | Interproscan |
| IPR001846 | Domain | von Willebrand factor, type D domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR003886 | Domain | NIDO domain | Interproscan |
| IPR005533 | Domain | AMOP domain | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR013032 | Conserved_site | EGF-like, conserved site | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR026823 | Domain | Complement Clr-like EGF domain | Interproscan |
| IPR035914 | Homologous_superfamily | Spermadhesin, CUB domain superfamily | Interproscan |
| IPR036364 | Homologous_superfamily | SEA domain superfamily | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| IPR050906 | Family | Notch signaling pathway | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24044 | NOTCH LIGAND FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG23814.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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