| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG23176.1 | TRNA-DIHYDROURIDINE SYNTHASE | tig00035315 | 54495 | 56477 | + |
| CDS | |||||
| RPACG23176.1 | |||||
| Transcript |
| RPACG23176.1 |
| Protein |
| RPACG23176.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01207 | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| PF01746 | tRNA_m1G_MT | tRNA (Guanine-1)-methyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR016009 | Domain | tRNA methyltransferase TRMD/TRM10-type domain | Interproscan |
| IPR018517 | Conserved_site | tRNA-dihydrouridine synthase, conserved site | Interproscan |
| IPR028564 | Domain | tRNA methyltransferase TRM10-type domain | Interproscan |
| IPR035587 | Domain | DUS-like, FMN-binding domain | Interproscan |
| IPR038459 | Homologous_superfamily | tRNA methyltransferase TRM10-type domain superfamily | Interproscan |
| IPR047911 | Domain | tRNA methyltransferase 10 homolog B, TRM10-type domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11082 | TRNA-DIHYDROURIDINE SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0017150 | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG23176.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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