Detailed information of RPACG22987.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG22987.1LEUCINE-RICH REPEAT-CONTAININGtig00035280164043177399-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050715FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45752LEUCINE-RICH REPEAT-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG22987.1 global RNA-seq network
TOP