Detailed information of RPACG22449.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG22449.1EGF-LIKE-DOMAIN, MULTIPLE 7, 8tig000352049847171006647+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR011489DomainEMI domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR050969FamilyDevelopmental Signaling ModulatorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14949EGF-LIKE-DOMAIN, MULTIPLE 7, 8Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001568Biological Processblood vessel developmentInterproscan
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007368Biological Processdetermination of left/right symmetryInterproscan
GO:0007507Biological Processheart developmentInterproscan
GO:0009952Biological Processanterior/posterior pattern specificationInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0038092Biological Processnodal signaling pathwayInterproscan
GO:0038100Molecular Functionnodal bindingInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0070697Molecular Functionactivin receptor bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG22449.1 global RNA-seq network
TOP