Detailed information of RPACG22139.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG22139.1POLY A POLYMERASE CID PAP -RELATEDtig00035165283526347032-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF03828PAP_assocCid1 family poly A polymeraseFamilyInterproscan
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF19088TUTaseTUTase nucleotidyltransferase domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR002058DomainPAP/25A-associatedInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR045100DomainTUTase nucleotidyltransferase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12271POLY A POLYMERASE CID PAP -RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan
GO:1990817Molecular Functionpoly(A) RNA polymerase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG22139.1 global RNA-seq network
TOP