Detailed information of RPACG21653.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG21653.1PHOSPHOLIPASE A-2-ACTIVATING PROTEINtig00035127642337659813-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08324PULPUL domainRepeatInterproscan
PF09070PFUPFU (PLAA family ubiquitin binding)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013535DomainPUL domainInterproscan
IPR015155DomainPLAA family ubiquitin binding domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR038122Homologous_superfamilyPFU domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19849PHOSPHOLIPASE A-2-ACTIVATING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0010992Biological Processubiquitin recyclingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG21653.1 global RNA-seq network
TOP