Detailed information of RPACG21445.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG21445.1TIGHT JUNCTION PROTEINtig00035116214401215998-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR001478DomainPDZ domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR008144DomainGuanylate kinase-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13865TIGHT JUNCTION PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005923Cellular Componentbicellular tight junctionInterproscan
GO:0045216Biological Processcell-cell junction organizationInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0150105Biological Processprotein localization to cell-cell junctionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG21445.1 global RNA-seq network
TOP