Detailed information of RPACG21115.2 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG21115.2PHD/F-BOX CONTAINING PROTEINtig00035102254399261514-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF17811JHDJumonji helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003347DomainJmjC domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR041070DomainJumonji, helical domainInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG21115.2 global RNA-seq network
TOP