| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG20111.1 | SECRETED MODULAR CALCIUM-BINDING PROTEIN | tig00035069 | 769163 | 794482 | + |
| CDS | |||||
| RPACG20111.1 | |||||
| Transcript |
| RPACG20111.1 |
| Protein |
| RPACG20111.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00053 | Laminin_EGF | Laminin EGF domain | Domain | Interproscan |
| PF00086 | Thyroglobulin_1 | Thyroglobulin type-1 repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000716 | Domain | Thyroglobulin type-1 | Interproscan |
| IPR002049 | Domain | Laminin-type EGF domain | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036857 | Homologous_superfamily | Thyroglobulin type-1 superfamily | Interproscan |
| IPR051950 | Family | Developmental regulator and protease inhibitor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12352 | SECRETED MODULAR CALCIUM-BINDING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005604 | Cellular Component | basement membrane | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG20111.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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