Detailed information of RPACG18451.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG18451.1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2tig00035028566750603506+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG18451.1 global RNA-seq network
TOP