Detailed information of RPACG16197.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG16197.1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEINtig0003498351679725179550-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01299LampLysosome-associated membrane glycoprotein (Lamp)FamilyInterproscan
PF21222Lamp2_2ndLysosome-associated membrane glycoprotein 2, transmembrane segmentDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002000FamilyLysosome-associated membrane glycoproteinInterproscan
IPR048524DomainLysosome-associated membrane glycoprotein 2-like, transmembrane domainInterproscan
IPR048528DomainLysosome-associated membrane glycoprotein 2-like, luminal domainsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11506LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0031902Cellular Componentlate endosome membraneInterproscan
GO:0072594Biological Processestablishment of protein localization to organelleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG16197.1 global RNA-seq network
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