Gene detail

Detailed information of RPACG15808.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG15808.1	KINESIN-LIKE PROTEIN KIF11	tig00034978	974966	1000816	-

Gene Structure

More details in Jbrowse Sequence

CDS

RPACG15808.1

ATGGCCACAGTCAATCGTAAGATGGAGCATGCCTCAGACAGCACTCGACAAGATGGTCCAATCACACTTGGCTGGCGTGAGTTGTACGAAGACCTGCAAGTCCACGAATATTACCCTGTGGATACATTTCTGAATGCTATAGCTGGATATGACCAGAACTTTCCTTTAACCAACTTATTCTTTGTTGTATTTGTACCTGCACAGAAATACACAGAAAGTCTGGTGGCAAATGGCACGGTCGTGCAAGGCCTGGACTTCAGTGGTATCGACATGTTGACGGATGATGTGTTTATTGCATTGAGAGGTTTATGTGAGAAAAACAAGATATTTGCTGAATCAATCACTACCCTGCGTTGCGTCGGCTGCGTACATCTCACAGACTGTGCCATTGAACAAATCGTCGCAGCACTGCCCAAACTAGAAACACTGCGCCTCTCCCTCTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACTGCCAGATGTGTCTCTCCCTGTCTCAATGCCAACTGCGCCTCTCCCTGTCTCACTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACAGCCAGCTGCGTCTCTCCCTGTCTCACCGCCAGCTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCACTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCAAGCTGCGTCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCACTCCCTGTCTTACTGCAAGCTGCGTCTCTCCCTGTCTCACTACCACTGCCAGATGTGTCTCTCCCTGTCTTACTGCAAGCTGCGTCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAGCTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTACCAGCTAGCCCATTTGTCCTTGGATGCGTGCCACCAGCTGACAGATGTCACCCTGTACCATCTCAAGCAGATCGCGGCTAGTCTGAAGTATGTTGGAATGTCAGGCACTGGCATCAGTCAGATACCACAGTGGGGCGGTGGTGTTAAGGTCGTCCTCGATGGCTGTGCAGTCGACTTAAGTGGTGAGGAAACAACCAAACCGGTGACACACGTCCTTAGGATAGAAGGGACAGAGGAAGGGATCGTCCCTCTCACCCACAAACTGGTGATGCTCTCCCGGGCTGCCAACTTTGATCATCTGTTGAAGTTCCTCAAACAGACAGGAGACGACAATGAGGACACCTTGGATGACAGTCCACTTCACCTCAGCAGCAGTGTCAAGTTCCATGACTTGGAGCACTCTTTTAACGTGTTCATGTGCGGCTGTGAAATGGACATGGCGGTGCCATTCCTCAGATACTCGGTCATGTACTTCATTGTACAAGACCTCGACGACAACTCGGAAAACCCTCATCTTAGCATCATGAGTCGTTTGAACTGGATCCGAGCTGAGGCATTGCACACGACAGTCATGATTGTGCTGTTGCACGGGACAGATGTGAGTGGAGAGAGGTCAAAGCAGGCAAAGACCCTCAACAAGTACCTACTCATCTACCTCAACAAACAGCAGGTTGTTCTCGAGGAAGACATCTCTCTAGAGGCGTGCACGGGTGAGCCGAACCGGGAGCGTGACTTCGCCACCCAGAAGCGGTTCTCGCGTTCCTCCCAAGCAGCTAGCAGCACCAACAGATACTGCGTGTTTGAACTCAACACAGCCACAAGCGAGTTAACACAGCACTCACCACGGCAGGCTAGTGTTGTTGATCCAAAGAAACTGGAGGAACTGAAGGCGAATTTGCAGACAAAACAACACCTCTGGCATTCGGAATATGAGCGGGCTGTGAACGCCATCGAGAGTATCAACAAATCTGATATTTCTATTGTGATGTCGATGAAAAAGCCACCCGCCTGCTTCTACCCTGTGGCTATGGGTGTCTGCATCCTGATGGGTGTGATACCAGCAAACACCAATGAGAGTGCTTGTTGGCCGCCTTTCCTCCGTATTATGAGAAACTTCAGGTCCCTTAATCAGATACTCAGCTACGATATTGAAACCATTACAACCGACACATTGGTTCATCTGGAACCTGTCGTTCAGAATCATGAAGAAGTCTTGCAAAAGGTGATGATGGGATCTAATGTGATGGCCGCCTTTTACAAGTGGATCTTGGCCATGTACCGCGCAGGCAAGGAAGTCGTGCCACTGATTAAGGAATATCGGACTCTGATGAAACAGCAAGAGGGCGACACTTCGGACGAAGCAACAGCTGTCATTTCGGAGAAGGGTCCACGGATGCTGTTAAGCCAAATGAGACGAGTCACGGAAGAGGTGGACACAAAGATACATCGACCTGCAAGTAGAGACGTCACTGTACTGGACAGGAGCGTGCTGGGTGTCTTGACCACACTCTCATCGCAGAAGATCTGTACGTTGGCAACCGTCCACAAACTGTTGACCACCGAGGACAAAGTTGATGTGGACATTCAGATAGTGTCCAACGCAGTTGACAAGATCCACAAACAGGGGAAAGTGCTGAGTTACCCAGATTCGCCAGGTCATGTGATTGTGACAGACATTGCTTGGCTCATGCGACTGCTGGTCCTGCTGGAACGACAGACAGACAACGTCACTATACAGAACGGGGCACGCTTCAAGGCCATAGCGCCTGAAGTGCCCATATTTGACCTGCCTATCATTCAGGGTCTGCTCGCCAATGAAGCTACACCTGAACAGACTGACCTCGTTGTCGCTGCTTTTCGACATCAGGGGGTGCTGCTGGACACCCCACGGAGTTCACACAGAGACCGTGACAAGGCAGGAGTTGTGAAGGATCCCATCATGCTGTTTACACACATCAATGAGCAAGCCTTCCTTAGAGATGCCCCAACTACCGGATCCAGCAAGCACTCTTCTCTCTTTGCAGAGAACTATTGGCCTCAATGGGGCACAAACAAATGTCATCAGACTGATATCGTGATACAGCGCAGCTATCGTTTTACTGTCGGCTATCCACCCGGTCTATTTCTGCGCATCATCTCCGAGTGCTGCAAGGTGGCACCAGTGGTTATGCTGTGGAAATGGGCCTTGGTAGCTCGGGTGGGCGCCGTCGAAGTAAACATCCGTCATAACCTGCACGGCACCAAGGTGTTTAGCAGTCTGGACGTGGAGGGACGGCTGTCGAAGGGCAGCGTTGATGCAGACGAGAAAGTGTTCCGTGAGAACTTATGGAATGTCCTACATACATACCTCTTGATCATTGAGTATTACATCAATCTCAGTCCAAGCCTTCATGTCACTATCAAAATGCCTTGTCAAGGTTCATGTGCAAAACAGGGAGAGACTTACAAGTTTAGCCAGGTCGAGCTTCAGCGGAAACTTGGCACTGGGTTGCAGTGTCCCACGTGTAAGACGAAAGGGATGTCAGCAGAAATGTCCTTGTTGCTGACAGGTGGGTGCTGA

Transcript

RPACG15808.1

CTGAAGGTGAAAATGGCCACAGTCAATCGTAAGATGGAGCATGCCTCAGACAGCACTCGACAAGATGGTCCAATCACACTTGGCTGGCGTGAGTTGTACGAAGACCTGCAAGTCCACGAATATTACCCTGTGGATACATTTCTGAATGCTATAGCTGGATATGACCAGAACTTTCCTTTAACCAACTTATTCTTTGTTGTATTTGTACCTGCACAGAAATACACAGAAAGTCTGGTGGCAAATGGCACGGTCGTGCAAGGCCTGGACTTCAGTGGTATCGACATGTTGACGGATGATGTGTTTATTGCATTGAGAGGTTTATGTGAGAAAAACAAGATATTTGCTGAATCAATCACTACCCTGCGTTGCGTCGGCTGCGTACATCTCACAGACTGTGCCATTGAACAAATCGTCGCAGCACTGCCCAAACTAGAAACACTGCGCCTCTCCCTCTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACTGCCAGATGTGTCTCTCCCTGTCTCAATGCCAACTGCGCCTCTCCCTGTCTCACTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACAGCCAGCTGCGTCTCTCCCTGTCTCACCGCCAGCTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACTACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCACTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCAAGCTGCGTCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCACTCCCTGTCTTACTGCAAGCTGCGTCTCTCCCTGTCTCACTACCACTGCCAGATGTGTCTCTCCCTGTCTTACTGCAAGCTGCGTCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCCCTACCACTGCCAACTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGCGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAACTGCGCCTCTCCCTGTCTCCCTCCCACTGCCAACTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTGCCAGATGTGTCTCTCCCTGTCTCACTGCCAGCTGCGCCTCTCCCTCTCTCCCTACCACTGCCACCTGTGCCTCTCCCTGTCTCCCTACCACTACCAGCTAGCCCATTTGTCCTTGGATGCGTGCCACCAGCTGACAGATGTCACCCTGTACCATCTCAAGCAGATCGCGGCTAGTCTGAAGTATGTTGGAATGTCAGGCACTGGCATCAGTCAGATACCACAGTGGGGCGGTGGTGTTAAGGTCGTCCTCGATGGCTGTGCAGTCGACTTAAGTGGTGAGGAAACAACCAAACCGGTGACACACGTCCTTAGGATAGAAGGGACAGAGGAAGGGATCGTCCCTCTCACCCACAAACTGGTGATGCTCTCCCGGGCTGCCAACTTTGATCATCTGTTGAAGTTCCTCAAACAGACAGGAGACGACAATGAGGACACCTTGGATGACAGTCCACTTCACCTCAGCAGCAGTGTCAAGTTCCATGACTTGGAGCACTCTTTTAACGTGTTCATGTGCGGCTGTGAAATGGACATGGCGGTGCCATTCCTCAGATACTCGGTCATGTACTTCATTGTACAAGACCTCGACGACAACTCGGAAAACCCTCATCTTAGCATCATGAGTCGTTTGAACTGGATCCGAGCTGAGGCATTGCACACGACAGTCATGATTGTGCTGTTGCACGGGACAGATGTGAGTGGAGAGAGGTCAAAGCAGGCAAAGACCCTCAACAAGTACCTACTCATCTACCTCAACAAACAGCAGGTTGTTCTCGAGGAAGACATCTCTCTAGAGGCGTGCACGGGTGAGCCGAACCGGGAGCGTGACTTCGCCACCCAGAAGCGGTTCTCGCGTTCCTCCCAAGCAGCTAGCAGCACCAACAGATACTGCGTGTTTGAACTCAACACAGCCACAAGCGAGTTAACACAGCACTCACCACGGCAGGCTAGTGTTGTTGATCCAAAGAAACTGGAGGAACTGAAGGCGAATTTGCAGACAAAACAACACCTCTGGCATTCGGAATATGAGCGGGCTGTGAACGCCATCGAGAGTATCAACAAATCTGATATTTCTATTGTGATGTCGATGAAAAAGCCACCCGCCTGCTTCTACCCTGTGGCTATGGGTGTCTGCATCCTGATGGGTGTGATACCAGCAAACACCAATGAGAGTGCTTGTTGGCCGCCTTTCCTCCGTATTATGAGAAACTTCAGGTCCCTTAATCAGATACTCAGCTACGATATTGAAACCATTACAACCGACACATTGGTTCATCTGGAACCTGTCGTTCAGAATCATGAAGAAGTCTTGCAAAAGGTGATGATGGGATCTAATGTGATGGCCGCCTTTTACAAGTGGATCTTGGCCATGTACCGCGCAGGCAAGGAAGTCGTGCCACTGATTAAGGAATATCGGACTCTGATGAAACAGCAAGAGGGCGACACTTCGGACGAAGCAACAGCTGTCATTTCGGAGAAGGGTCCACGGATGCTGTTAAGCCAAATGAGACGAGTCACGGAAGAGGTGGACACAAAGATACATCGACCTGCAAGTAGAGACGTCACTGTACTGGACAGGAGCGTGCTGGGTGTCTTGACCACACTCTCATCGCAGAAGATCTGTACGTTGGCAACCGTCCACAAACTGTTGACCACCGAGGACAAAGTTGATGTGGACATTCAGATAGTGTCCAACGCAGTTGACAAGATCCACAAACAGGGGAAAGTGCTGAGTTACCCAGATTCGCCAGGTCATGTGATTGTGACAGACATTGCTTGGCTCATGCGACTGCTGGTCCTGCTGGAACGACAGACAGACAACGTCACTATACAGAACGGGGCACGCTTCAAGGCCATAGCGCCTGAAGTGCCCATATTTGACCTGCCTATCATTCAGGGTCTGCTCGCCAATGAAGCTACACCTGAACAGACTGACCTCGTTGTCGCTGCTTTTCGACATCAGGGGGTGCTGCTGGACACCCCACGGAGTTCACACAGAGACCGTGACAAGGCAGGAGTTGTGAAGGATCCCATCATGCTGTTTACACACATCAATGAGCAAGCCTTCCTTAGAGATGCCCCAACTACCGGATCCAGCAAGCACTCTTCTCTCTTTGCAGAGAACTATTGGCCTCAATGGGGCACAAACAAATGTCATCAGACTGATATCGTGATACAGCGCAGCTATCGTTTTACTGTCGGCTATCCACCCGGTCTATTTCTGCGCATCATCTCCGAGTGCTGCAAGGTGGCACCAGTGGTTATGCTGTGGAAATGGGCCTTGGTAGCTCGGGTGGGCGCCGTCGAAGTAAACATCCGTCATAACCTGCACGGCACCAAGGTGTTTAGCAGTCTGGACGTGGAGGGACGGCTGTCGAAGGGCAGCGTTGATGCAGACGAGAAAGTGTTCCGTGAGAACTTATGGAATGTCCTACATACATACCTCTTGATCATTGAGTATTACATCAATCTCAGTCCAAGCCTTCATGTCACTATCAAAATGCCTTGTCAAGGTTCATGTGCAAAACAGGGAGAGACTTACAAGTTTAGCCAGGTCGAGCTTCAGCGGAAACTTGGCACTGGGTTGCAGTGTCCCACGTGTAAGACGAAAGGGATGTCAGCAGAAATGTCCTTGTTGCTGACAGGTGGGTGCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13931	Microtub_bind	Kinesin-associated microtubule-binding	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025901	Domain	Kinesin-associated microtubule-binding domain	Interproscan
IPR047149	Family	Kinesin-like protein KIF11-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47970	KINESIN-LIKE PROTEIN KIF11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005876	Cellular Component	spindle microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0008574	Molecular Function	plus-end-directed microtubule motor activity	Interproscan
GO:0051231	Biological Process	spindle elongation	Interproscan
GO:0072686	Cellular Component	mitotic spindle	Interproscan
GO:0090307	Biological Process	mitotic spindle assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG15808.1 global RNA-seq network