Detailed information of RPACG11509.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG11509.1SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINtig00003247624194625349-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00435SpectrinSpectrin repeatDomainInterproscan
PF15410PH_9Pleckstrin homology domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR001605DomainPleckstrin homology domain, spectrin-typeInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR041681DomainPleckstrin homology domain 9Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005543Molecular Functionphospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for RPACG11509.1 global RNA-seq network
TOP