Detailed information of RPACG10820.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG10820.1E3 UBIQUITIN-PROTEIN LIGASE MIB2tig00002949846379874787+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF06479Ribonuc_2-5ARibonuclease 2-5AFamilyInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000719DomainProtein kinase domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR010513DomainKEN domainInterproscan
IPR010606DomainMib-herc2Interproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR038357Homologous_superfamilyKEN domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG10820.1 global RNA-seq network
TOP