Gene detail

Detailed information of RPACG09171.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG09171.1	ATP SYNTHASE SUBUNIT	tig00002354	905371	953341	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

RPACG09171.1

GGTGTGGATGATGTTTGTTTTGTGTTGTTGCTGTCTAAACGTGTAAAGTTGAAGTGACAGTGTTTGTGTCTGTTGAACTCTACGATGGCGCATTGTTGAGGTTAAGCGGCACTCAAGTGATGTAGCACCGTGACGGGATCCAGTCCAGTTTGTAGTGAATAGAGATGAAGACGCAGCATTTAAGAGTGCCGTGAGACGAGTATAAGCAGCAGTATTGAAGAAATGGCGACATTCAAGACAAAGATTAGTCTGTGGGTGAGATCGGAGCTGTTCGCCTATGGTGCACTTCCAGTTGCACCACATCCCAGGCTGTCTGTGCATAATATTAAGAAGATAATTCCATACGCAAAGTCAAAGGGTAAATCGGGCTTTCCAAAACTCGGTTACTCAGTATGGAAGAACATTGCCTGCAACAAGCTTCAGCTACCAATGGATTTAGCGTGGATGTACTTCGTGACATTTGACATGTTGGTGTTGATGTCCCCAGAAGAACGGCTGGAGCGGGACGAGAGGTTTGCTCTGTGCTCCTCGCAGCAGGAGCTTGAGATGTGCAGGAGTCGGATGTCGGTCCCTCTCCTGCGGTTCGTGCTCTTCCTCTACCTGCAACACTTCCACAAGATCTCTCTGCGGTCCTCCCTCGTGTCAGGCAACGTCGAATGGCCAGTGGCATCGCAGCCGCCCGAGTTGGACACCCGGTCCATGAGAGGAAAGAGTCTGGATGAGCATGCCCACATGACGTTTGTTCTGAACAATCTCAAGGAGATATTGGACCTGTTGGCTGCTCCAGATAGTTCGAGTGATTCAAAAGAGACTTGTTTATCTGTTGACGCTGTTGAGGCGCTTGGGTTCATCATAGCTGGCTCCGTCGATGGCAACAGGACAGAGAAGTCACTACAGGAGATTGCGATGATGCAGCAGGTTTACCAGAAGAGCGGCTACTCAAAGGTTAATGTAGCCACTTCTCGCAGTCCGCGAGGCTGGAAACTTGTGATCTCACGCACCTTTCCAGTCAGAAACCTTCAGTCATGGCTCCACTCCCACATTCGACAGAACCCATTTGGCATTTCTGCGTGCATCACATCCGGCCGCAGACTCTCGTGGCCACTATCGGGTGAATATCGTGAGGCACAAACAGACAGTAAGCATGGCAGGATTGCAACAAACACAACCTTTGTGCCGCCAGACCAAGTGAAAGGGAACAAGATTGTAATCATGTCACAAGTGTGCAAGCAGACAGTGGCGAGGAGCTCTTCAACTCTGGAGAACGCAAGTCTGAAGATACACAGGTGTCACTACTCCTACATCTACCTGTTGTCATCTGTCAGGTCAGTGAGCATAGAGAAGTGTCGACACAGCACCATTGTCATTGGCGCTGTCGAGACGGCCATTCACGTGAACCAGTGTGAGCAGGTCAAAGTGATTGCTGTCTGCCGCAGGCTCAGCACCAGTGGCTCCACCTCTTGTACATTCCACATACTGACACCCAATCGCCCCCTGGTGTTGAGTGGCAACGAGCGTTTGACCTTTGCCCCCTACCACACCCACTACCCGCAGTTGGAGGAGCACATGGCTGAGGCAGGTCTCCAGGCCAGGCCGAACTTGTGGGACAAACCTCTGTCTCTGTCAATAGGTCCAGAGCAGCGGCCAGAGTTCCCAATCTGGGACGTCATGGACCCAAAAGACCTCTACTTGTTTGCCATTCCTTTCCACATGGACGGCGACACTATGGGTATCGTTAGTACTTTGCCGGCTGCCTACCAGAAGGCGCTACAGGACAAGGAGCGTCAGATAAAGCTTTGGCAGAAGACAGTAAAGGAGACGGGGCTGACAAAGGAACAGCGAAAATGTTTCCAGGCAACGGTCGAAGCCACATTCCAAGAGTGGCTCACCCGCACGGGGTACAAGAGGGAACTAGACGCACTGTCATACACAGTGTCATCGACACGAAGAAAATAACTACAAATTGTAGGGACGTTCGCTGTGTATTGCAAAATTTGACGTTGAGTTTTGTTTCATCGTCTGTTGAATTAGAGTGTGCTGGTTACAGCTAAGATAGTCAGGTTTACCAGTAAGAATAAGTTGTCTGTGATGGAGTATTAATCTCCAAATAATGATGTCTTGCCGAGCTATTTACGCCAGGTAAGCTACGCGGATACTATGAAAGTTGATTGTAAATATTGCAGAATAAAATAATTGTTTGTCTTTGTGCATTTTCAACTTGGGGTTTTAGAACTACTTAGACAAAAGCATAAATCATAGCATACGAGTGTTTGTGTCCCCTAGGCATGAAGCTACAGCTTGATTGCAGTGAAAAGGACTGCATATCGTTTTAAAAAGATACCGTATGTTTTATCTGTTAAAGGTAAAACATTAAACTATGTTGGAGAGACCCCAACACTTTCTCTCTCTTTCTCTCTCTGTATAATAATAATATGATGATATAAGTTTGCGCCATAAAACTAGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04718	ATP-synt_G	Mitochondrial ATP synthase g subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006808	Family	ATP synthase, F0 complex, subunit G, mitochondrial	Interproscan
IPR016702	Family	Mitochondrial ATP synthase subunit g, animal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12386	ATP SYNTHASE SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000276	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	Interproscan
GO:0015078	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0015986	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0046933	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG09171.1 global RNA-seq network