| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG06379.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | tig00001717 | 511247 | 513815 | - |
| CDS | |||||
| RPACG06379.1 | |||||
| Transcript |
| RPACG06379.1 |
| Protein |
| RPACG06379.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00024 | PAN_1 | PAN domain | Domain | Interproscan |
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF00431 | CUB | CUB domain | Domain | Interproscan |
| PF12662 | cEGF | Complement Clr-like EGF-like | Domain | Interproscan |
| PF14670 | FXa_inhibition | Coagulation Factor Xa inhibitory site | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000859 | Domain | CUB domain | Interproscan |
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR003609 | Domain | PAN/Apple domain | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR026823 | Domain | Complement Clr-like EGF domain | Interproscan |
| IPR035914 | Homologous_superfamily | Spermadhesin, CUB domain superfamily | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR050350 | Family | Complement & Cell Adhesion Regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG06379.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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