| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG05852.1 | DNA2/NAM7 HELICASE FAMILY | tig00001550 | 903547 | 904593 | + |
| CDS | |||||
| RPACG05852.1 | |||||
| Transcript |
| RPACG05852.1 |
| Protein |
| RPACG05852.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06839 | zf-GRF | GRF zinc finger | Domain | Interproscan |
| PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
| PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010666 | Domain | Zinc finger, GRF-type | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR045055 | Family | DNA2/NAM7-like helicase | Interproscan |
| IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10887 | DNA2/NAM7 HELICASE FAMILY | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG05852.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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