Detailed information of RPACG05559.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG05559.1TRANSCRIPTION FACTOR-LIKE 5 PROTEINtig00001493264227268256+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR039583FamilyTranscription factor-like 5/SOLH1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15402TRANSCRIPTION FACTOR-LIKE 5 PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0007283Biological ProcessspermatogenesisInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG05559.1 global RNA-seq network
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