Detailed information of RPACG04900.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG04900.1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDtig00001306311654321257-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12714TILaTILa domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR025615DomainTILa domainInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050111FamilyC-type lectin and snaclec domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22803MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for RPACG04900.1 global RNA-seq network
TOP