Gene detail

Detailed information of RPACG04132.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG04132.1	HSC70-INTERACTING PROTEIN	tig00001082	822020	857486	+

Gene Structure

More details in Jbrowse Sequence

CDS

RPACG04132.1

GTTTTCGTGGTCGTACCAGTCGTAAACAGCATATCTGGGTTAGACGTCAACTGCGTAGGACCAGCAATGGGCACCCGAGTTCTCCAACGATTTTATCGTGGCCTGCAAGCTTTGAACAAATGCAAGAGCATCGGCGTACGACGCTCAACGCGTTACATTGAGGTCACCACTGGCTGTGGCTTTCACACAAGTCGGCGCAGAAATGTGAACATTATTTATGATCCAGTCGAAGCAGTAAGAGAAATCAAAGATGGAGCAAAAATATTAGTTGGAGGGTTTGGGCTGTGTGGAATACCTGAGAATCTAATAAATGCCCTTCTTGAGACGGGGGTGAAGGATTTGGTTGCCGTGAGCAATAACGCTGGTGTGGATAACTTTGGACTTGGTCTTCTCATTCAAAGCAGACAGATCAAGCGAATGATTTCATCATACGTGGGCGAGAATGCAGAGTTTGAGAGGCAGTACCTGTCTGGAGACCTGGAATTAGAACTGACACCACAGGGTTCTCTGGCTGAGCGAGTGCGGGCCGGCGGTGCAGGTATCCCAGCATTCTTCACTCCGACTGCCTACGGTACGATGGTACACAAAGGGGGAGTTCCTATCAAGTACAACCCGGATGGCACAGTTGCCATTTGCAGTGAGCCGAGAGAGGACCGTGAATATGGAGGCAGAGGTTATATCTTGGAGGAAGCAATCACTGGGGATTACGCCCTGATCAAGGGGTGGAAGGCAGACAGATGTGGCAATGTCACATTCAGGAAAACTGCTCGTAACTTCAACGTTGGCATGGCGAAGGCTGGCAGACTGGCCATAGTGGAGGTGGAGGAGATTGTAGATACAGGAGAGATCTCGGCGGAAGACATTCACCTTCCCAGTATCTACGTCCACAAACTCCTGCAAGGGAAGAGTTATGAGAAGCGAATAGAGAAACTGACACTGAGCAGAAGAGAGAAAACAGCTGATGACACGCCAAGTGAGGGCGAACTACGCAGGACTCGTATCATCAAGCGAGCTGCAATGGAGTTTCAGAATGACATGTATGCAAATCTAGGCATTGGCATGCCTATGTTGGCCAGCAGTTACATCCCTGCCGGCATGGTCATACATCTACAGAGTGAGAACGGGGTCCTAGGTCTGGGTCCGTACCCAAAAGATGGCGAACAAGACCCGGATCTGATAAACGCAGGGAAAGAAACAGTGACAGTTGTACCTGGATCATCTTACTTCACCAGTGAAGAGTCATTCGCCATGATACGCGGGGGTCATGTAGATCTGACAATCCTTGGTGCTATGCAAATCTCCAAGTACGGAGACATTGCCAACTGGATGATACCACGCAAGATGGTGAAGGGAATGGGCGGGGCGATGGACCTGGTGGCCAGTCAGAGAACTAAGGTCGTTGTCACTATGGAGCATACGGCGAAGGGAAGCAAACACAAAATCCTTAATGAGTGTAACCTTCCCCTCACGGGTACCAAGTGTGTCGACATGATCATAACGGAGAAGGGCGTTTTCAATGTAGACCACAGTGAAGGTTTGACTCTCGTTGAACTGGCAGAAGGTGTCACTGTTGACAACATCCGTGAAGCAACTGGTTGTGATTTTGAGCACGGCGCTCGTTACGTCTACGAGACTGACGACGACAACGTTATGTTGGACAACCTGCGAGGTTTCCGCATTGACGCACATCTTCCGCGCGGTCTTATGCCAGCAACTGATCGATTTACTTATAACCCGTACCCTCACTTCGGCCAAGCGTCTTTGTGGCCACGAGGCTACCCATTAGAGGCGGTCGGACAGGACACAATCAACAAATATCGGCTGCGTTCGGTGCGACAGGCGTCCATACGACAGGCTGTAGCGAATGGTGATCCCGATGTCGATGCCATATTCCGACTGACCCGGAGACATCACAGCGACGATGGCAAGCTTATGTTTGATGCTGCAGCGCCACACATCGTAATACCGCACGGTACTTTCGTCCCGTTCAATTCGCAGGATACGCTATTTGCCGCGGAGGCATTATGGGCTTTGGTTTTACCGGCGACACTATCGGACAGAGTTTGCGACATAAACAGATCCTACTGGGCCCAAACTCTCTTGTGGCTGGTGAATGGTCATCTTGGATTCTATCCTCCAAATGTGCTACATGTTCGTAACGAACATTCATTTCTAAAGGATATGACTCAGGAAATGGAGATGTACGAAGACATGGGACGGCTTGTCAAGTTCCTTCACAACTGGACATGTGATCGATTGTCATTGTATGACTGCATGATCCAATTGGCAGAAAACATGGCATTAAATAAGTTCTGGCTGAAACGTGATGCTGAGGTGATCGCCGCTTGGGTTGCTGATCTGAAAACCCTAGGATATTCACCCCCTGTCGTTAGACAGTCTAGCTCGTTATCAGATGGATTGCCGGTAACATACTTTCCATACGAACAAGAAACGTCGTTCTCACATGTTGCCAGCATGTCACACAACAGCAAAAAGAAACCGCAGCCTATCTACGATGTCGTAATCAATGTGTCGACACAAAGTCGCGGCCATTCAGACGACGGCCGCATGTTCAGTTTTGCAATCGTCGGGCTCACCTCCCATCTGCGATGTTCGTGCTCCACCGGTGGCATTAGCCAACGGCAGATTCGCTCCAATCCACCTGGACGGCGCGTTATATACCAAAGAGTCGTTCTGGGCCTTACCTACAGCGTTGCTGGCTGA

Transcript

RPACG04132.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF18253	HipN	Hsp70-interacting protein N N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR034649	Domain	Hsp70-interacting protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45883	HSC70-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0051085	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG04132.1 global RNA-seq network