Gene detail

Detailed information of RPACG03974.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG03974.1	DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS	tig00001047	1991490	2015444	-

Gene Structure

More details in Jbrowse Sequence

CDS

RPACG03974.1

ATGGAGGGAGTGCGGGTTGTGGACCGAGTGCAGGTTGTGGAGAGAGTGTGGGTTGTGGAGGGAGTGCGGGTTATGGAGGGAGTGCGGGTTGTGGACCGAGTGCGGGTTGTGGAGGGAGTGCGGGTTATGGAGGGAGTGCGGGTTGTGGACCGAGTGTGGATTGTGGAGGGAGTTCGGGTTGTGGAGGGAGTATGGGTTATGGAGGGAGTGTGGGTTGTGGAGCAAGTGCAGGTTGTGGATGGAGTGCGGGTTGTGGAGGGGGTGCGGGTTGTGGAGGGAGTGCAGGTTGTGGAGCGAGTGTGGGTTGTGGACCGAGTGCGGGTTATGGAGGGAGTGCGGGTTGTGGACCGAGTGCGGGTTTTGGATGGAGTGCGGGTTGTGGACCGAGTGCAGGTTGTGGAGGGAGTGCAGGTTGCGGAGGGAGTGTGGGTTGTGGAGGGAGTGCAGGTTGTGGAGGGAGAGCGAGTTGTGGAGGGAGTGCGGGTTGTGGAGGAAGTGCAGGTTGTGAAGGGAGTGCGGGTTGTGGAGGGAGTGAGTTTTGTGCACCGAGTGCTGTTTGTTTCGACAATGCGTCTATGTCTGACGGTGACAGCCGTCGTGACATTGGTGTTGACGCTATGTGTTTTGTCGGAGGGGCAGTATGACAGCCGCGTGCCCCCACAGTGGGCAGTTGACCAAGGCAACCCCTTTTTCCGTGACACTTACTGCCCACCGGATGCGCGCTGGCCGTGCGATCGGTTTCCCTTCTACCCGTACGACGAGATCCATCGAACCATACCCAATACGGGCATCGTGGTGGGACGTTCCCTTATATTTGCTCCCCATCGATACATCAATATATTCCGAGGGGTGCCGTACGCTCGACCACCCTACGGGGAACGTCGCTTCAAGAAACCTGAGAGACCTGGTCCAAGATGGGACATGGGAATTCGCAAGTGGGACGCATCGTTCTACCGTGACGCTTGTCCACAGGAACTCTGGAATCTGCAGGACAAGTTTTATGAAATGAGGAACATGAGTGAGGACTGTCTTCACCTCAATATCTTCTCACCTAATATAACAGATCGAGTCGGAGGTCACTACCGCAACCGTCTCTATCCCGTGCTTGTCTACGTACACGGGGAGGACTTCAAGCTGGGAGATGCTGCGCTCTATCCCGGTCACATCCTTGCCAAGAGAGAGGTCGTGGTCATCACCTTCAATTACCGTCTTGGTGCCCTTGGATTCATGAGCACTTCCAGTGAACATTCGCTGGGGAATTATGGGTTGTACGACATTATTGAAGTGCTGGAGTTCATCCAGTCATACATTACCATATTCCGAGGTGACCCTTCCCGTGTGACCTTGATGGGTTCAGGGTCAGGGGCTGCGAGCATTGGCCTCTTGATGGTGTCGCCAAAAACACAGCAGTCTCGTAGTGGAGGCCAGAAATTGTTCCACCAAGTGATCTTAATGGCGGGGTCAGACCTGTGCGATTGGACGGTGGTGGGGCCCCACTACTTCAGCAACCCCCTTGAGTACACCCAGGAGCTAGGGCGTAAGGTGGGGTGTGACCCCGACTACGGCGTGCCCATGGATATCGTAATGGAGTGTTTGAGGTCAAAGCACTTTGACGAGATCGTGAACGCATCAGCCAACGTCTGGAGAAAGTACGGCTCTCTTTCTGGGCCCTTCGGTCCGGTGCTCGATGGGCCTGACGGGCTCCTGCCTAGGACACCGGCAGAGTTACGTAAGGGTGATAATGTCATGAAAGTGAACATTCTTGCTGGAGTGACAAAGGACGAGGGTGCATACATAGCAGAAAATATCACAAAAGACATTCTCGGCCTGCGGATATCGGAAGGAATGTCCCCCGGTACCTTCCGTGACATCATTGACAAGATGATACGGGAGCGCCCTCTGGTGCTGAACATCGACGAGGTTGTTGGCGCCGTGGAGTTTGAGTACACCTTCTGGGCGAAGCCTGATAACACATCGGCTGTACGACAGAACCTCATTGATCTCTACTCTGACATGATGTACGGCTCCTGTGTAGACGCAACACTTAAGGCTCACCTCATGTTCAGAGACAACTTCCAGTCTGACACCAGTCTCTACATGTATGTGTTTGAGCATCGATCTGAGTACGAGCCACTGCCATACTGGATGGGTGTACCTCATGGCAAAGACGTCGACTACTTGTTCGGTCACCCGTTCTTCAACATGACCCTAGGCAATTTAACCGGCATTGTCCCTGCTCAGTGGGAGTGGACAGAACTTGACCGCAACATCAGCGAGTTTGTCCAGAACATGTGGCTCAACTTCACGTTAACCGGGGTGCCTACCCCAGACTGGGAGAGGAATGTATCGTGGTATGAGATGACCCCTTACAACCTCAGCTTCCTCCACATAGCAGAGTGGAGCTACATGGATGTGAACTTCCGTCAGAATCACTATGCCTTCTGGCGGGACTACTTTCCTACTGTGGCCAGTCGCTACCCAGTGACAACTACCCCAATCCCTACCCCTCGCCCCCGCATTGAGTACGAGACAGCAACCTGGTCACTAGTGGGTGTTGCCCTCATCACAGTCTTCATCATAGTTGCCCTCGCCATCACCCTCTGGAGGCGGGGCAGGAAAAGCTTCCTCTGA

Transcript

RPACG03974.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08646	Rep_fac-A_C	Replication factor-A C terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR013955	Domain	Replication factor A, C-terminal	Interproscan
IPR043522	Family	DNA damage-induced apoptosis suppressor protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35537	DNA DAMAGE-INDUCIBLE APOPTOSIS SUPPRESSOR PROTEIN DDIAS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:1902230	Biological Process	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG03974.1 global RNA-seq network