Detailed information of RPACG01712.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG01712.1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.tig0000050710986281098936+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG01712.1 global RNA-seq network
TOP