Detailed information of RPACG01413.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG01413.1DYSTROGLYCAN-RELATEDtig0000038238479293854297-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05345He_PIGPutative Ig domainDomainInterproscan
PF05454DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan
PF18424a_DG1_N2Alpha-Dystroglycan N-terminal domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR008465DomainDystroglycan, C-terminalInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR027468Homologous_superfamilyAlpha-dystroglycan domain 2Interproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR041631DomainAlpha-dystroglycan N-terminal domain 2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR21559DYSTROGLYCAN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002009Biological Processmorphogenesis of an epitheliumInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0016011Cellular Componentdystroglycan complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016203Biological Processmuscle attachmentInterproscan
GO:0021675Biological Processnerve developmentInterproscan
GO:0042383Cellular ComponentsarcolemmaInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG01413.1 global RNA-seq network
TOP