Gene detail

Detailed information of RPACG01280.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG01280.1	-	tig00000382	1847637	1861796	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

RPACG01280.1

CTAATATGGGCATTGGCTAAACAGATCTGCGTTCCACTTGGTTATGTGTAGTAACAAACACTTCTTTGCGTGTCACTTATAAACTGAGCGTTATCACAACCACCAAATATGCCAGAAAAACCAAAAGCTCCTGAGGTGTTTTCCAACCCTCTTGCACCAGAACCGGTGGAAGATGAAGAGGAAGAAGATGACTACAGTGGGGGTCAGCCACTGACAAACGATGACTTTCGCAAGTTGATGATGACCCCCCACAACTCCCGCTCATCATCCACAGCAACAACCAAACTATCAGCCAAGTTGTTGAGCGAGAAGAAAACACGACTGAAGGACATCACAGAGGAACCAGAAGATGACGAAACAGACGATGCAGCCTCCCGGAGGAGGAAGAAGAAGATGTATTATGCTAAGCAGCATAAACTGGAGGAAGAGAGAGAGAAGGAGCTGTCCAAGTTGTACAGAGACCGTGCAAAGGAACGACGTGAAGGGAATAACAACGACTATGACCAGCCAGAGATTGCCAGTACCACAGCCGACTACAGGGCCGTGGCGCCCGATGCCAAGGCAGGGGAGAACTATGCGGAGAGGCGGAAACAAGCGATCCAGGAGTCAAAGTACCTCGGAGGCGACATGGAGCATACTCACTTGGTGAAGGGGCTCGACTACGCTCTGCTCGAGAAGGTGCGAGCTGAGATATGCAGCAAAGAGGAAGTGGAAGAAGAAGAGATGGAGGCAGCAGTGAGCTCAGCCAAGAAGAAAGAACGAGAAGAAGAGGAAGAAGAAATGATGCAATTCAAGACAAAGATGGGGCGGAACATCTTTCGTACATTGTTCCGTAGACAGTTGCCAGAACGCAATGAATTGTTCCTGCCGCAACGGATGGCCTACGTCATCGATCTCGAGGATGACTTTTGCGAGTCTGACATCCCTGTAACGCTGATACGCAGCAAGGCAGACTGCCCCACCATGGAGTCAACGACGACTCAAACAGCAAACGACATTGTCATCAACAAACTCACCCAGATCCTGTCATATCTACGCCAGGGCCGTAAGGAGAGCAGGAAACTGAAGAAGAAAGACAAAGGGAAGCTGAAGGAAACTGCTGAAGACAGACACAAAATGGCGGACGATGGTATCTACGGAGATGTCCACGATTACATTCCATCATACGAGAAAGCAAAGGAGAAGGATCGGAGGGAGTCGGACAAAAGGGAGAGAGGAGGGAGGGAGAGGGACCACCACCGCTACCACGACAGGGACAGAGAGCACAACCGGGACCGAGACCGTGGACGCAAGAGGGAGTCGGAGAGGGAACGGGAACCAAAGAGATCCTACTTCGAGAAACCTGCAGAAGAGGACGACAACGACCGCACAAAGCTGCCATCTTCAGCGAAGGAACTCGTCCAGTCAATCAACTCTCGCTTTGCCTCTCAGGGTTGGGGAGAGGGCGAAACTGGAAGCACAAATGTAGAGAAGAAGCTGTCAAAGGAGGAGGAACGATTGGCCAAACTGAAGCAGAAGATGATGATAGACAGTTACGCTGAGTGCTACCCAGGGATGATGGAGTCGGCAGATGCCTTCGGAGACAGTGATGATGAAGTGGACTACACAAAGATGGACCAGGGAAACAAGAAGGGACCAGTGGGGAGGTGGGACTTCGACACTCAAGAAGAATACAGCACTTACATGGCGAACAAGGAGGCACTGCCAAAGGCGGCATTCCAGTATGGTGTCAAGATGGCTGATGGTCGTAAGACACGGCGGACAGGACCAAAGGATGAGAAGGCGGTCCTGGACAGAGAGTGGCAGCAAATTCAGAACTTGATGGCAAAGCGCAAAAAGATGGGAACGGAGGGCGAGCCGTACACTAAGCTTCCTAAATACTGAATGATCCTTGCATGTATACTGCAATTTTAGTCGTTTATTCTTTCTATTATGTTTCTCTCCATGCGAGAAACATGGTATAGCAGCTAAACCGAAGAGACGAATGTTGCTAGGTTAAATATTTGCGTATGGATTAAATGACAGAGTATAAAATGGATAGAAAAAGTAAAGTAAAACAGCATCAAGGTGAAGTTAACAGTCTTGGGGTTTGTAAGGACACAGAGAATTCTGCAGGTCTCTCATGTGGGGACTTTCTGTTTCTCAAAACTCATCTAATTGGTTGAACCACTGCAGTATATAGTGCCACTGGAATGGGTCGGTTGAAATGTCTGTAAGCTGCACTTTTCACAATACGTACTGCGTCCAGTTAGTCTAAATGCTAGCATTGTATTACCTGATGTGAAATCGTTTCCACTGATGCATTCTTGTACATAGTGTGTAGTGCATGTGCGCAGTATCAACTGTATTTGTCATGATAGCATTGTGTTAACTGTAATCAAATAAACTGTTTCCGTACAGGATCCTGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03473	MOSC	MOSC domain	Domain	Interproscan
PF03476	MOSC_N	MOSC N-terminal beta barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005302	Domain	Molybdenum cofactor sulfurase, C-terminal	Interproscan
IPR005303	Domain	Molybdenum cofactor sulfurase, middle domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0030151	Molecular Function	molybdenum ion binding	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG01280.1 global RNA-seq network