| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG00828.1 | PEPTIDOGLYCAN RECOGNITION PROTEIN | tig00000162 | 4400462 | 4401488 | + |
| CDS | |||||
| RPACG00828.1 | |||||
| Transcript |
| RPACG00828.1 |
| Protein |
| RPACG00828.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF01510 | Amidase_2 | N-acetylmuramoyl-L-alanine amidase | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 | Domain | C-type lectin-like | Interproscan |
| IPR002502 | Domain | N-acetylmuramoyl-L-alanine amidase domain | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR006619 | Domain | Peptidoglycan recognition protein family domain, metazoa/bacteria | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR015510 | Family | Peptidoglycan recognition protein | Interproscan |
| IPR016186 | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR036505 | Homologous_superfamily | N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11022 | PEPTIDOGLYCAN RECOGNITION PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0008745 | Molecular Function | N-acetylmuramoyl-L-alanine amidase activity | Interproscan |
| GO:0009253 | Biological Process | peptidoglycan catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG00828.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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