Detailed information of RPACG00517.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00517.1NISCHARIN RELATEDtig0000000269537316963579+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15454NISCHARIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG00517.1 global RNA-seq network
TOP