Detailed information of RPACG00499.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00499.1CLEAVAGE STIMULATION FACTOR SUBUNIT 1tig0000000267440196747534-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF16699CSTF1_dimerCleavage stimulation factor subunit 1, dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR032028DomainCleavage stimulation factor subunit 1, dimerisation domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR038184Homologous_superfamilyCSTF1, dimerization domain superfamilyInterproscan
IPR044633FamilyCleavage stimulation factor subunit 1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44133CLEAVAGE STIMULATION FACTOR SUBUNIT 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005848Cellular ComponentmRNA cleavage stimulating factor complexInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG00499.1 global RNA-seq network
TOP