Detailed information of RPACG00290.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00290.1SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATEDtig0000000230940303095240-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF15519RBM39linkerlinker between RRM2 and RRM3 domains in RBM39 proteinDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR006509FamilySplicing factor, RBM39-likeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR029123DomainSplicing factor RBM39, linkerInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48036SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:1990446Molecular FunctionU1 snRNP bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG00290.1 global RNA-seq network
TOP