Detailed information of RPACG00231.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00231.1RING FINGER AND SRY DOMAIN-CONTAININGtig0000000219980782005925-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR035774DomainRING finger and SPRY domain-containing protein 1, SPRY domainInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR045129FamilyE3 ubiquitin-protein ligase RNF123/RSPRY1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13363RING FINGER AND SRY DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for RPACG00231.1 global RNA-seq network
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