Detailed information of RPACG00199.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00199.1NOTCH LIGAND FAMILY MEMBERtig0000000213372941344093+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000082DomainSEA domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for RPACG00199.1 global RNA-seq network
TOP