Gene detail

Detailed information of RPACG00142.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG00142.1	PORCUPINE	tig00000002	384836	402695	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

RPACG00142.1

ATTAGAATGTAAAGGAAGGTCGTGTTTGGTAGTCGTTCTGCGCATTTACCTTATTAACTCCCGCAACATTAATGGCTTCCGATAATACCGCTGTCCACTTGCTAGCCGGAGGCATCGGCGGGACGGCAGGGGCGGTGATAACGTGTCCACTGGAGGTCGTCAAGACACGGCTACAGTCATCCTGCGCAACATTCCAGACAGCCACATCTGTCTACGTTCACCAGGTGGTCAACCAGTGCCCTGGCCAGACGCCAAGTACTTACAAGTACAGTACTTGCACGTCCCTTCCCACGCACACCCTCAGCACGGCCACGCAGGCTGGCCTCGGGCACACCAAGAAGATGAGTCTCTACATGTGTCTCAGACATGTCATCCAGACGGAGGGTGTGAGGGGGTTGTTCAAGGGTCTCGGGCCTAATCTCGTAGGCGTGGCGCCATCTAGGGCCATCTACTTCTGTGCGTATGCCCAGAGCAAGGTGTTCTTCAACTCTGTCTTTACTCCAGACACGCCCATTGTCCACATTGGATCAGCTTTCATTGCTGGGTTCACAGCTTCGACAATGACGAACCCAATTTGGTTCATCAAGACACGATTACAACTTGACCAGAAACGTAGCGGTGGTCTGACGACGCTGCAGTGCGTGCGGTCGGTGTACCAACAGAAAGGCATTGTGGGCTTCTATAAGGGTATCACAGCGTCATACTATGGCATCGCGGAGACCATCATCCACTTTGTGATCTATGAGAGCATCAAAGCCAAGTTGTGTGAGTGGCGAGGGGAGGACCTCTACTCCGACGAACGCTCCCCCATCAATTTCCTTGAGTTCATGTGTGCAGGGGCCGTGTCAAAGACCATCGCCACGTTCTTCGCCTACCCTCACGAGGTGGCGAGGACGCGACTGAGGGAGGAGGGCAACAAGTACCACAAGTTCTGGCAGACGCTCGGTCTTGTGTTCCGTGACGAAGGCTGCCGAGGCCTGTACCGAGGACTCAATGCACAGCTGCTGCGTCAGATCCCAAACACTGCCATCATGATGGCAACGTACGAGGCCGTCGTGTACTTGTGCTCGCGTCGCCTGCCCACGTAATGGGGGTTGTCAAATGTGTCGTGTCCATTATATGTACCTCGGACGCCGGGGGCACGTGCTGTCCAGCAGGAGGCGTAATGTGATAGGTGCTGCAATCTGGCAATTATTGAAGATACCAGAAATAATGCAGTGTTGCCACCTTGTGAAAGTTGCTACTGACATCCAGACTTGGCTACTGGAGAGCTGGGTCATTGCTCAATACCAACACACTAAGCAAGTTGTTGTTGCAACATATGCACACCTGTAGTGGGGTTCCCTCAAAGTCAACAAAAGGAAGCCAGTTTCGTCTGTTGCATGATGGGAGAGTGCGGTAACAGGAAAAATGAACGGTTTCGATGTTTTGACAATTATCAGTGTTGATGACCTTCCAGACTGTTAAGTGACTATTTATTCGAGACATTCTGCCGAATGCTTCATCTGTGTTACAAACTCTGACAACAGTGGGTTTGTGCATATAAAGCCTTTCAATACGTGTTATCGATCGAGTCATACGGGTCACTTGTTATCCTTGAGGTCTGTTGTAAGCTATAAAACTCTTCAATTGTGCACAAGTCTTGTTTTCAAGCAATAGAGCTAGTTGTCTTGGCAGAGGTGCAGTTCGCAGCCTGTTAGATGACGACCATTATTAGTAAGGAATTAGAAACAGACTAAGCAGTCAAAACACAGTGTAGAACTGCTTGTTTTGAGAGCTGAAGGAATTCGCTTAAGGATAGTTTAAGAGAATTTGATAGTGCTGGAAGAGGAAGAGCTAGAACAAATGTAAAGAGAAAATTGATCAGTTGCCAGTTGTTTGTACCCAGTGCCAACGGGCAGGGAATGACAGGCGTACAGGTGTGATAAAACTGTAGTGATTTGAGAACAGTTACAGGTGCTGTAGAACATCCATGAAGATCATAACTTGCTTTCATTGGAACCAGGAAGACATTGTTCACATGTACGTGTGTGCTTTGTGTATAGAAATTCTCTCTTACGCACTTTGTTGTCATTTTTGCACAGCTCTGCTGGCCACAGCTGGTGTCCCCAGTGTTTGTAAATGTACTGTTAATGCAAACGTTTCTTCAGCGTTTGCATGGCATCTTTTGCAGGGAACAACACCATTGCGATGTCTTACCAGTATTATTCCACCATCTTGCAAGTCTACATCTGTGACAAGCTGAATTGTACGCTGATGGCACAGTGTGCTGCCAGCAGACACAGTTGACATTTGAAGTGTCTTGGAATTTTATCAGTATATTGATGAATGTCAAGCCAAATGTGATTCTTGTAGCCAGTTAATTGTTCATCTTGTAGGTTGCATTTGATCCGAGTTGTATTGAGAATGCCACATGTGTACTGTCATCGGGTGGAAGTGTGTGTGTGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03062	MBOAT	MBOAT, membrane-bound O-acyltransferase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004299	Family	Membrane bound O-acyl transferase, MBOAT	Interproscan
IPR049941	Family	Lysophospholipid acyltransferase 7/Porcupine-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13906	PORCUPINE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0017147	Molecular Function	Wnt-protein binding	Interproscan
GO:0018345	Biological Process	protein palmitoylation	Interproscan
GO:0030258	Biological Process	lipid modification	Interproscan
GO:0061355	Biological Process	Wnt protein secretion	Interproscan
GO:1990698	Molecular Function	palmitoleoyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG00142.1 global RNA-seq network