Gene detail

Detailed information of RPACG00133.1 in Riftia pachyptila Gene info

Gene ID	Annotation	Contig	Start	End	Strand
RPACG00133.1	SERINE/THREONINE-PROTEIN KINASE	tig00000002	300512	308294	-

Gene Structure

More details in Jbrowse Sequence

CDS

RPACG00133.1

ATGGGACACAAAGCCGCCAAGTTCATCATTTTGCTCACAATCACGTTGTGTATTATTCTCAATGCAGGTGATTTGCTGGGGGTTCTCAAGGCAACTCAGCCTGAAACGAAGTACTCGGCATTGTTGAAAGTGAAACCCCGCGCAGAACGCGAGGACGACGTACAAGAAGAACGACCGCCAATTGACGATTACAGCGCCGAGATCGTACTATCGAGCGAGCATGTTACGCCCACCCATGAATCTCCCAGACATCTAGCGGAAAGCGATATTGAACGATCTGGTTTGGGCGGCGTCGGACCAGTAGATGTTGCGGCAAATGGTCACTTCAACTCGGGAGAGAGAAAATTAATACGACAAGACGAAACTCCACCTCGGAGTGGCGTTAAACACAACAGACCATATATTCTTCCGCGCCTTGTCGCTTACTACCGGGGGATAGCGTGGACTCCGAAACCGAGTTCACCAATTAACACGATCCGGGAAACGAAGACTACTACTACGACGAAGCAAACATTGTTGAGTAAAATGAACAAATTTGCCAACGACAAGACACTTGACCACGTAGGCAATCATTTCCCTTTCGGCAGCCCTGAGTATGTCAGATCCACAAAACGACCGTCGAATGGTAAATACACAACTGTCGCACCAATGTGGTCCGTGCAGAAGCAACCACAGCATGAGCGACAACAGCAACAACAGCAAACACGTCCGATATGGTCTGCAATGTCGCAGCAGAAGCAGCCGCTCCAACTGGAGCATCGCCGCTACAAGGAACAGCAAGAAGAACGACAACAGTATCAACAACCACCTCAGTTGTCATTGCTCCAACAACAGTCCAGAGAGCGTCCTCAACAGATCATTTTGCCAAACTCGCGCTCTAACAACAAGTACAGCATTGTGTACGTTCGCAAGTCCCGCGTGAACCCACGTTTGTGGGCCTACTACCAGAGTGGGAACTTGAGTAAGCATACCCAGACACGGGTGGACCCTGCTAACGACAGTGACTTCATGGCATCGCCGGAACATAGCGTTCGATCTACGAACGTAGTCACTGACGTCATAGAAACAGTGGCAGACGTGAATGCGGCAGGAAGTGCCACCAAGGAGCTTACCCCAGCCGTCGTCACGCTGAAACTAGGCACCGAGCCGACCAAGGTGGTGTTGGTGACGTATATGCGCGGCGGGTCGAGTCTCTTGGGAGAACTCCTGAATAGCAACCCGCGGGCTCTGTACTGGTTCGAGCCGATCGATGCTGTCTACAGTCACTTGTACGGCACGGCCGAGGGATGGCTGCCGCTGGACATTACGTTTGATCAAAGCAGACAAATGAGACGACCACCGACGTACGAGGAAACCGCCCTAATCGATACTGCCCGCCGACTGTTCGACTGCGACGTCAGTGCTCTGTCAACGGAAGTTCTTACTAACTACTTCCTCCTGAACCAAGGCGCCTCTCAGTTTAGTCAGCTCGGCCTCGCACCCTATGCCGCCTGCGTCAGGCAGATGCTGACTCAGCGCGGGTTACCTGTGACGTCACAGTGTAATGACGTCACCGAGACGGCGTGCGCGAAACATTTCGGACGCAATGACGAACTGATGAAGTGTTACGAGAAACTGGGAGAGGTTCGTGTCCAAGACTTCAGTGACGACCGGGGAGAGAAAGTATCGCCTCTGGACATCGCGTGTCGTAAACGGGAATTGTGCGTGCGGATACGACGCCAGGCGGCAGCACGGTGTCTCCCATTATTGCACGCCATATGCAACCGGACCGAAATCCGCAGTCTAAAATCCATCCGTCTCCGCCTGGAGACAGCACTATCTTTGGTTCGTAAGTACCCGGATGTGAAGGTGGTGTATTACGTCCGGGACCCCAGAGCCATCATTGCGTCTCGTTGGACAGGGACGGGCGGGCTTGTGTCCTCGGTATCCGGAGGGGATGTCGTCATTGAGGCACAGCTGCTCTGCCGCAGAATGCGTGCAGACATCCAGATATGGACGCGTGCGTCCGCAGCATTCCCGAAAAATTTCATGATGCTCAGATACGAAGAGCATCATGGATGTAAGACGAGTTTCGCGAACGTTTTACGACTTTTTAAAGCAATCGATCCCACAGGAAGTGCACAGTTTCACCTTCCGTGCAGCGCATATGCGCTCTAA

Transcript

RPACG00133.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004683	Molecular Function	calcium/calmodulin-dependent protein kinase activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for RPACG00133.1 global RNA-seq network