Detailed information of RPACG00090.1 in Riftia pachyptila Gene info
Gene IDAnnotationContigStartEndStrand
RPACG00090.1PROTEIN BARK BEETLEtig0000000118316591866241-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for RPACG00090.1 global RNA-seq network
TOP