| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| RPACG00086.1 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED | tig00000001 | 1780253 | 1804309 | + |
| CDS | |||||
| RPACG00086.1 | |||||
| Transcript |
| RPACG00086.1 |
| Protein |
| RPACG00086.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05729 | NACHT | NACHT domain | Domain | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13374 | TPR_10 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007111 | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR025662 | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR051191 | Family | DDB1-CUL4-associated factor 12 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19860 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0080008 | Cellular Component | Cul4-RING E3 ubiquitin ligase complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for RPACG00086.1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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