Gene detail

Detailed information of Paelopatides60387 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides60387	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	utg93149	117602	138203	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides60387

ATGGAGACGTTAGCCGTCATCATCCCCTCCCTTGCCAGGGGGATGTGGGCGACTACGATCGACCTCAGGGACGCCTACTTGCATATCCCTATTGCACCCAAGGACCAACACTTCCTGGGTCTACGCTACGGGGGACAAACACTCTTGTTCTCGTCCCTACCGTTTGGCCTCTCCACGGCTCCACAGGTTTTTACCCGAGTGGCTGTCGTGGTCGTCGCCACGCTCAGGAAGCAGGGGGTGGTTCTCTTCGCGTACCTCGACGACTGGCTGATCCTAGGGGACTCGAGACCAGTCGCAGGACCGAACGCACCGAGTTATCACTTTCCTTCAGTCCCTGTACCTAGGCGCGCGACTAGACTTCGTCTCTGGCCGCCTGACTCCCTCCGAGGAACGCGTGTCCTCTCTGGTCAGGGACGTCTCTCTCTTGCAGACCGGGCAACCCGCCACGGCCCATACGTGGTTGAGGGTGTTAGGTCGCATGGCGAGCCTGTCGGACGTAGTCCCCCTTTGCCGCCTGCGCATGCGTTTCCACCTTCTCGCGCATTTCAAACCCCATCTGAGGGATCTCACCTGTGTGATCCCCCCGGCAGAGACACTCCAACCACACTGGCAGTGGTGGAGCGCGGAGACCAATCTCCTCGCGGGTGTACCGTTCCCGATTCAGCGGAATCCGATCACAGTAACAACCGACGCCTCCCTGTCCGGCTGGGGTGCTTTTGCGAGGTGCGGACGCTCTCGGGACTGTGGTCAGCCCAGGAGCGCACGCAGCACATCAATGTGCTGGAACTCGAGGCTATCGCGAGAGCCGTCAGGCGCCTGACGGACTTGTGGTGCTCAGGGAACGCGGCTACTCCCAGTAGTGCGTCTCTGAAGCAATTCTTCTCGTTCTTAAAGATGATCTTCGACGAAGGTAAATGGGTTAGCACCATCAAGAACTTTTGGTGGGCCATCGAAGAGATCCGAGAGCGAGCGTCACACACTATGCAGGTAAAGAAAGTGTGTTGCATAGGAGCAGGTTATGTGGGAGGACCAACATGTTCAGTAATAGCAAGTAAATGCCCTGAAGTCAGAGTAACAGTGGTTGATCTCAGCCAGGAAAGAATAGATGCTTGGAACTCTCCCGAATATAATTTGCCCATCTTTGAGCCAAACCTAGCTGATGTTGTCAATAGGTGCAGAGGGAAGAATTTGTTCTTCTCTACAGATATAACAACAGCAATACGTGAGGCAGATCTCATCTTCATCTCTGTGAACACACCCACAAAGACATTTGGTTTAGGGAAGGGAAGAGCAGCTGATTTGAAGTACATAGAAGCCGCAGCACGGATGATCGCAGATGTCGCAGTCGGAGATACAGTGGTAGTAGAGAAAAGTACTGTGCCTGTCAGAGCGGCTGAGAGCATCCAACGGATACTTACGGCAAACACTAAGAAAGGATGTGCGTTTCAGGCACATGCTGTTGGTCTGGAATACCAGGAACTAGGTTGTGGAGTTTCAGGTGGCAGGCGTTCTCAGCCTAACATTGAGGATGCCTTACACAGAGTTACCAGGGATGCGTACCGAAAGTTACTAACAACGGCTTACTTCATAGCGATTGATGGGCTACCACTGTCCACATTTAAGACCCTTGTTAGAGTACAGAAGGTGAATGGAGTTAATTTAATTCAGGGAACAGAGAGTAGCAACAGAGCTTCTGAATTTGTACATGAACTCGCTGATGCTATTCGTGTAAAGCTAACAGCCCTTTTGCACGCCTCAACTGCATTTTCTGTTCTGAGCGATGGCTCTCAAGCAAGAAAGACTGGAAATGAAAAGGAGTTAGTCATGGTTCGAATTGTAAAAGCTGGACATCCAATTTATTTTGTTGCAGCACTAGAGGACATAGACAGCTATGGAGATGCAAATGCTGAAAATCTGCACAAATCCATTGACAATGCATTGCAACATAAAGTGAAAATACATGTGGACCACTACACCAATGGTTTGGTGTCCTTTACTGCAGACGGTGCATCAGTGAATACAGGAATCTACAGTGGTCTTCTTGTGAGAATGCAGAAAGCTCAACGCCCTTGGCTTGTAAAGATCCACTGTGTATCTCATCGGTTGGAACTTGCTGTGAAGGACTCTCATGAAGGAGAAAGCCTTTGA

Transcript

Paelopatides60387

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03721	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR001732	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR028356	Family	UDP-glucose 6-dehydrogenase, eukaryotic type	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11374	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003979	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006024	Biological Process	glycosaminoglycan biosynthetic process	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-