Gene detail

Detailed information of Paelopatides57386 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides57386	PROLACTIN REGULATORY ELEMENT BINDING PROTEIN	utg697	124233	159857	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Paelopatides57386

ATTTAAGAACTTGGCAGTACCCTAGTATGACCAAGAAATTAGACATAGAGGCTCACACAAAAGAGATTGACGACGTTATAGTTAATCCAGTCGGAAACATGGTAATTTCAGCTGGTAGAGATTGTACTGCTCGTGTCTGGCATACAAAGGATGGTAGCCATGTTTGTGACTTGCAATGGAATGGATGTAAAAATGCTAAAGAATACAGATTCAAGTCATGTAGGTTTGGTTTCTTAGATGGTGATCCAACGCAATCAGCATTATTTACCATCCACATTCCAGCCAAGCAGAAGAAACACTCACATTCTTACCTCTGTAAGTGGAACGATACAACCTTTAAGCCTTCCAAGACAGTATCAACAGGAACAGAGATCTTATCAGCCCTAGCTATCAGTCACAGTGGTCACTTTATCGGAGTCGGTACGATGACTGGTTCCATCGGTGTTTACGTAGCCTTCAGTCTAAAGCGTATTAAATGGGTTCAGAATCATCACAGTATATTTGTGACGGGTCTTTCGTTTGTTCCAATGACTCGTAACTCTAGAGCAATTCTTGGCGACCTCGACACTGCATTAATGAGTATATCAGCTGACCAGAAAGTTGGACTCCTCACCGTTGATAATCCTAGGTCCTATCCTATGTGGCTGATGTTCTTTGGTGCTGTATTTATGATCATCATCATAGTAGCACTGCTTGCAGCTTATGGCGTGGACTTATAGACAATCACACACATCAGATACTGGTTAAGTTAAATCAAAGGTGGTTTGGACTGCTCATACCTTGCCAAATATCTGTAAATATGTATTTTAAAGTTTTGTAACATTTCAGAGGTCTTAAAGAATAAGGGAAGGAGGTATTTGCCGCAGTTAGTTTGTATATTTTGAAAGCCACTGCTGTACCTTATAACACTATACTAACCAGTTAACAGTAAAGTAATATTTATACCTTTTGGTACTGATGAAGAGGTGCTTCCTTTAGTTAAATATAAGAATATCTATAAATATATACATGTTGTGTCACTTGCACTAAAACAATTACACCTCATACTCCCTGTCCTACACATGGTCATAGTGTGTTACTGTTTCTGAGTCACTGGCTCTAACAGTGTAGATGCTCCTAGTCACATGGTCATAGTGTGTTACTGTTTCAGAGTAGCTCTAGCAGTGTATACATGCTGTGTCACTTACACTAATAACCTGTACAATTACCTCCCATCAGAACAATGACATGGTGGGGTGTAGATGCTCCTAGTCACATGGTCATTGTGTGTTACTGTTTCAGAGTAGCTCTAACAGTGTATACATGTGTGTCACTTACACTAAAAACCTGTACAATTACACCCCATCAGAACAATGACATGGCAGAGTATAGATGCTCCTAGTCACATGGTCGTAGTGTGTTACTGTTTCAGAGTATCTCTAACAGTGTATACATGCTGTGTCACTTACACCATCAGAACAATGACATGGCAGAGTATAGATGCTCCTAGTCACATGGTCGTAGTGTGTTACTGTTTCAGAGTATCTCTAACAGTGTATACATGCTGTGTCACTTACACTAAAACCTGTACAATTACACCCCATCAGAACAATGACATGGCAGAGTATAGATGCTCCTAGTCACATGGTCGTAGTGTGTTACTGTTTCAGAGTATCTCTAACAGTGTATACATGCTGTGTCACTTACACTAAAAACCTGTACAATTACACCCCAACAGAACAATGGCATGGTGGGGTACAGATGCTCCTAGTCTCATGGTCATAGTGTGTTACTGTTTCAGAGTATCTCTAACAGTGTATACATGCTGTGTCACTTACACTAATAACCTGTACAATTACACCCCAACAGAACAATGGCATGGTGGGGTATAGATGCTCCTAGTCTCATGGTCATAGTGTGTTACTGTTTCAGAGTAGTTCTAACAGTGTATACATGCTGTGTCACTTACACTAAAAACCTGTACAATTACACCCGAACAGAACAATGACAAGGTGGGATATAGATGCTCCTAGTCACATGGTCATAGTGTGTTACTGTTTCAGAGTAGCTCTAACAGTGTATACATGTTGTGTCACTTACACTAATAACCTGTCCAATTACACCCCATCAGAACAATGGCATGGTGGGGTATAGATGCTCCTAGTCACATGGTCATAGTGTGTTACTGTTTCAGAGTAGCTCTAACAGTGTATACATGCTGTGTCACTTACACTAAAAACCTGTACAATTACACCCGAACAGAACAACGATATGGTGGGGTATAGATGCTCCTAGTCACATGGTCATAGTGTGTTACTGCTTCAGAGTATCTCTAACAGTGTATACATGCTGTGTCACTTACACTAAAAACCTGTCCAATTACACCCCATCAGAACAATGGCATGGTGGGGTATAGATGCTCCTAGTCACATGGTCATAGTTTCTTACTGTTTTGGAATAGCTTTAATGTCAGATTACTATTTTTTCTGACAAAAAAAGGAGAATATTTTTTATTTATTTTGGTGCAAAGATTTTCTTTGTGACATGTCCAGCAGCAACCAGTATCGATTTAAGAGTATAGATGAATTATCTCTATAATTTATTTCACATCAGTTTTTGCAATAAAATCTCTCAGATGTCACTAAATTTTGACATTTTGTGGCCTATTTTTATGCTGTGCAATTCTTGCAGCTGCTGCTAAAGGAATGTACATACAGTACATGCTATTAAATATAAAATCCTTATTTATAAGATTTACAAAAAGTATTATTGAATTTAAAAATTATGAGACGCTTCGTCTCTATATCATTGACCCCAAAATAGAAACTTTTTTTTAAAACTATGCATACAGATAAAAAATACCCCACATAGCTGAAAATGTTTGGAAGACTAATCTGGTCATGCAGTGAGGTTTTCTCCAACTTTGATCTATAATTTTGTACTAAATCCACTTACTTTTCTCTTCGTACATCTTGATATAAAAGGTGTTTCCTTCTTGTGAATGCAAACCACTCAGGGGCAATGATCTAAATATTATAAGCTATGACGCAAACATGTGCAACAGAGATTGAACTCGTGTCACAAGTGCAAAAGAAATTCTGACCCGGATAGAACTCATTAATCTCTTAATCTGGGTCGGGATCTGCATTGAACAATGAGCTCTGGGTCAACGTTGAAGACAATATTGTGTAAATGCTCTCTGAATTAAAGACAACCCGTGGTCAATCATGACATCTGTATTTACATACAAAATAGTATATCAGTGTGTATGTAATCTATTATGCAACACTTCTGTGTGACAGTTTCATGTCACCTAGATCCAGTGTACATGCACTACAGTTAAACTCCCAAGGAATGTGATCTCCCAAATGGCTAGGTGGCTTCGATCCTGGTCTATCCATATACTGTTACTACTGGCAATATCATTGGTATAACATCAACTTGACCCTGCAAGTTTGATTGTAGCATCAAAGATGACTGATTTCAACTTTTCCATTGCCTGTAAACATGACTAGGATGTAACGCAAGATACTTTGCATGACTAATTTAAATACGAGTTGCTGAATGTATATCTACTCATAGCTAGACGATCAATGGGCAGCTGGAATTTTAAATTTAAATATTCTACTTTCATTTAGAAGTTATTTCTTACATGTCTTGATGTAAATGTTTGTATTTTATCGTTTTTTTTTGTTTTTGTTTCTAGAGTTCTGGGG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR045260	Family	Guanine nucleotide-exchange factor Sec12-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23284	PROLACTIN REGULATORY ELEMENT BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003400	Biological Process	regulation of COPII vesicle coating	Interproscan
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009306	Biological Process	protein secretion	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-