Gene detail

Detailed information of Paelopatides57175 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides57175	RAD50	utg6837	657658	675941	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides57175

ATGATACACAAGGAAGAGACAGAGAGAACTCATATCGAGAATCAGATAGATGACTTGGAAATGAAGAATCTGGCCGTGGAGGAAGACCTGTGCGAAATCAGAAAGAAAATTCAAGTAGGAGATGAAATCAGACGAGATATTTATTGCTTGGAGGGGAAAAGACGAGACCTTGACACCGACCGCCTCAGGATAAAGGAGAAATTACGAAGACAATCCACAGAAACACTTTGTACAAAGGATCTCCAAGAGCAGGTAATTACAACTGAAAGTGGTATCAAGAAGCTGGAGCGACTTAAGAAAATGAGCCGGAGCAGAGCCGAGTCTGTGCGCAAGGAGATGGAGGAAATGAAAGTCTTACAAACACTGGAAGAAGAGAGAGCTAGGAAACAGCAACGGGTGGAAGAATTAGGCATTGCAATAGCTGATAGGAAAGATGACATTAAGTTGATAATGGTGGACCTCTTATCTCATTGTAGCAGTCTACCTCAAGATCTGGAACATGTCATCAACTTATGCATTGAGACATTGGACTGCGGGGATATGAAAGGAAATAACAGAATGCTGGCTCTACAGATGCAAGAAAATGTATGGAAGTCTGTAGCAGCTTTAACACTCATCAAAAACAAAGCTTGCAAAATAACAAATTACGTTCAAGAAAGGGTTATGGAAGTTCAAATCAGGTTGCAAGATATGAGCGAAAGATTAGACAGTGGGTTATGCAATCCTACGGAAGATTGTTATACGATGAAACGAAGAATAGTGGGGTTGAGTGATGACCTGTCTAGCCCACTGAAGAAAAGGTTCAAGTGGCAGAAATGTGAGGATCTACATTCAGTAGGTGACAAGATGGAGCAAGATGCCCTGACCAAGCTAGTCTATGAGATGTGTCTCCTGGATCAGACTTGGAAGGATCTCGGGAAACTTCAGATGGAAATAACAAAGCACCGGGAAACTTGTCTGGAAGATGGTGAAAAAGGCTTGGAAGAAGCGAGTGTAGAGTATGACACCTTACTTGCAAAAATAGAAAATATTGACAACAATTTGAAGCAGAGTTTTGATAAACTGTCAAACTGCAGGAGAGAAGAGGAGAAAAAGAGGCAACAACATCGAGAACGAACAGAGCTAGACTGGAAGAGGAATCTGACAATGGACACAGATAAAAGAATACAGGAGCGGAAAAGCCAAGTCGAGTTCATGCTGTTCCGTCAACTCAGGATGGAAGAAGAGAAACTAAAAGATTATAAACGAAACATCAACTCCAAAAGATTCACATACATAGGAAACCTTTCTGAACTGACCAAGACGATAGCTGAAAGACGGGTAGAGTTTCTGAGATCGCAGAAGAGCATCAACCAGGAATCAAGAGACAACTCCATAAACCTGATGACCATGCGAGACATCACTCATGACTTGGAACAATACAGGAATGCTTTGGATGAAGCTATAGTCAGGTTCCACCGGATGAAGTTACTTGAAGTTAATGAGGAAATTGAACGACTATGGGTGAAGACTTACCAAGGAAATGACATTGATTCCATCAAGATTGAAGCTGCTGTAGACAAAGGAGATGGACGTAGAGCTTATAATTACAGGGTAGAAATGGTGAAAGGGAAAAGGAGAATGAACATGAGAGAGCGTTGCAGTATGGGACAGAAGGTACTTGCATCCTTAATCATCAGGATAGCATTAGCCAGGATCTTTGGGGGGTCATGTGGAGTATTGGCCTTAGATGAGCCCACCACTAACCTGGATGAACCAAATGTCAGAGCCCTGGCAGAAGCCCTGAAGAGTATCATTACAGAGTGTGCCAGCCAATCAAACTTTCAGTTGGTCATCATCAGCCATAATGAAACATTTGTTGATATTTTGGCAAGAGACTACGGAAAACACTGCTATAAAGTCACCAGAGATCGCAACAAACACTCGGTGGTTGTGAAGTATGACACAACATTCCTTCATTTGCCTTCCATATTGATGGTGGAAAGCATCGAGAAACAGTTTGCAGAACAAGGTAGAAGAAGTAGATACTTTAGCCACTGA

Transcript

Paelopatides57175

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13304	AAA_21	AAA domain, putative AbiEii toxin, Type IV TA system	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18867	RAD50	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000722	Biological Process	telomere maintenance via recombination	Interproscan
GO:0000794	Cellular Component	condensed nuclear chromosome	Interproscan
GO:0003691	Molecular Function	double-stranded telomeric DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0007004	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0030870	Cellular Component	Mre11 complex	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0043047	Molecular Function	single-stranded telomeric DNA binding	Interproscan
GO:0051880	Molecular Function	G-quadruplex DNA binding	Interproscan
GO:0070192	Biological Process	chromosome organization involved in meiotic cell cycle	Interproscan
GO:0090305	Biological Process	obsolete nucleic acid phosphodiester bond hydrolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-