Gene detail

Detailed information of Paelopatides56579 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides56579	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED	utg65016	48270	96567	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides56579

ATGGTCGCAGCATCAGTCGTCGCCTTCCTACGCAAGCAGGGAATACCCCTCTTCATTTACCTCGACGACTGGCTTATTCTCGGCGAGACCGAAGCTCAAGCGATTTACAATGTCCATTTCACGGCCACAACACTACGTCGTCTAGGCTGGATCATCAATCTAGAGAAATCGAGCCTAGCTCCAGCCCACTCGATCGTTTACCTGGGCGCAGACCTCCAGTTCCAAACGGGAATCGCCCGGCCATCAAAAGAACGAGCAGACAGCCTAACCAAAGCCATCAGGCTGCTTCTCGACACGGACTCTTGCCAAGCGAAGCTCTGGCTACGAGCCATCGGCATCGTGGCGAGCTTTGCCGACCTCGTCAACTACTGCAGGCTCCGAATGAGACCTATCCAGTTCCATCTCTCAAGGCACTTCGACCCGACGAAGGACCTGATGACAAGGATGGTGCCCCTCACAGACCACGTGAAACCACACCTCCTTTGGTGGCAAGACTCGACCAACTGGGCGCAAGGCGTCCACTTCAACCCACAACGCCCATTAGCACTCTGGGCTCGATATGATTTCCATCACAGTGGAAGTGTGAACTACCAAGAGTTTTTACAGAAATTAGGAGTAGACATGGAAATTATACAACACTCTGCACCAGCAAACAGAGGAGGTGCAAGATTAGGACAGGACAGGACGAACAAAATAGCCATCATCAACAGAAGTGACGATCCCATCAGGGGAATGAATTATAGACAGATAGAAGCTGAACTAAGGAAAAGGTTACGAGATAACTACGTAAATTTGAAGAAAGCTTTCATGGCTTTTGATGCCAATAGGGACGGCTTTGTGACATTGGATGACCTAAAGAGTATCATCATACACTTCACCATTCCTGTATCGGATCAGTTATTTCAACAGCTTATGGAAAGAATCGGTTTCAAAGCTTCTCACAAGATTCCGTGGGAACATTTCCTGGATAAGTTTCAAGATCCACAGAGCATTGGGAATGGACAGACTATTCCAATTAGACCGTATAATTACAAGTGTAATCCGATTCGAGAAGCCGAAAGACCCTTCACGGTGAATGAGATTGTATCACTTCTCCAAAATCATGTCTCAGATATGTACCCATCCTTCAAGCAGGCTTTCTTGACCTTTGATGAGGTAGAATACAGTGTCTCTCATAGAGGAACAATTAACCGCGACGGTAAGATCACACGGAAAGAACTGAAGAAGATTTTGGATAAATTCACCATCCGTCTTAGTCCATCGCAATTCCAAGGACTGATGGAACATTTAGACCCAGAAAAGAATAATTCAATAGATTATCACACATTCCTGGATACTTTTGAACATAGAGAGACAAAGGAAGGACACAAGTGGTTGAACTCTGAACACAGATTTAATAACATAGCTCCAGCTAATTTGGCCTGGGATACCATCGAAGAGATTCTCTGTGAGAAGATCGAAGAATACTGGAAACCTATCTGCCAAAGCATAAGATCGGCTGATACGAAGGGAAGCGGTAACCTGAGTCATCAACAACTAAAAAAGATCTTAGCCAGACATGTCCTACCAGTATCGAATGAGCATTTTGACAAGTTATGGAACCAATGCCAGGAAACACCAGAAGGCAAAGTAAGAGTAGCTGAATTTTTTGGAAACCTTGGAGTTGATGCATCGCCTGGGGACTTGGTGGGGTTAAGTACTCAGATACATGTTTTCAGTGACCTTACAGAGCAACAGAGACAGGTAGACTTGGATTCAAGTTGCTTTTATCATTTTATATTGTCCTCCTCTCCCCTTCCCACCCCCTCCCCCTGTAGACTTCGACAAGTGCAACAGTTGGCACAACAGCAAACCAATCAGATGACTGCAGATGAAGTCTTGATCAGGCTCAAGGACAGGATGTCTCAGAAATCAAGCAGTACCAGAGACAACTTCCTCAGATATTGCAAGAACAGGACAGGAAAGTTATCCGGAAAGGAGTTCCGTCAGGTTCTAGATAGCTTTGGCATGTACATGAACGACGAGCACTTCAGAAAACTTTGCGACAAAGTAGGTTTCAGTCGAGGTCCTATGATGTACTCTGACTTCATCCAAGGATTTGAGGATCTAAGGACCAGAGGGCCTGGAGACGAGATCCAGAGGTACCCAAACCATTGGTACAAGGTCTTGGATGCAAAGACGATGTCATCACAGGAAGTAGCGACCGATCTGAAAGATAAACTGAGACAGACGTTTAGGAGTGAGAATTTAAGATCTGCATTCTACAAGATGGACGACGACCACGATGGCTTCGTCAAGCAGATAGACTTCAGACATCTGTTTGACCACATGATGATGATCATCGACAACGATGAATTCGCTAAAATTATGGACATCCTCGACATCGGGAAAAAGACAAAATTATCTTACTTAAATTTCCTCCATATATTTCAAGAGACGGACACATCCGAGGGTCATAAGTGGTTGGACTCTGACCACAGGTTTAACGATACTCTCGATCCAGCGCAAATGGCAGTCGAGCAAGTCCACGAGATCCTCGTTGCCAAGGCTCGGAGACACTACCACGATCTTGCCAAGGCATTCAGGTCTATCGACAAAAATGGGAACGGCGTGATCCAGAAAAAGGAACTCCGAGATCTCTTGTATACCTTCATGCTACCGATCACGAAAGAAGACTTCACTAAACTCTGGAATAAGTATGACTTGGAGGGCAAAGGATATATTGATCACCAGCATTTCCTAAAAGTGATGGGAAGATCCTTCGCGCCGAGTGACGCCGCCGGAATTAGCAGACGAATCGTTGACGAGTCCATGGACACCATAGAAAATCATCATCAAAAACAGCTGGAAAAACAAATCAACATCACTTTGAATCAAGCAAACAGTTCCAACTTCATCTCGGCCGATCGCCTCGAGCAATCTCTGAAGGACAAGATACGAGACAGATATGGAACATTCCAGGAAGCTTTCGCAAAAATAGATCAATCAAAGAGCGGTTTTATCTCGGTGAAAGATTTACAAAAGATCATGGTGGATCATAACTATCTAGTGGACGATACAACTTTGAAGCAATTGTTACATAGACTTGGACTACCTTCTGACAAGAGCAAGCTGTCCTACGAAAAATTTCTGAAGGCTTTTGATGAAGGTATGGAAGCTCAGTATTGCCAGAGGGATAGTGCAGACGTAGCGGTCAATTCTTTCAATCATCTCAAGGCCGATAAAGCAGCCAAGAAATTACGGAGGATAGTACAGGCCAACTTCGGCGTGCTTCAAGCGGCATTTGCGGCATTCGACAAAGAAAAAAAGGGCAGAGTCGGGCCTTCGGAATTCCGTCGAATCTTGGACAACTTTTGTTTCAAGCTTTCCGACAAGCAGTTTAAGTTTCTATTGACCAACGTTAAAGTGAACGAGGACCTCTCCATAAATTACCCAGCATTCCTAGAGGACTTCTCGGTCAACGAACATGAGCTGGCTCAGAATTGGATCGACTCTATTCAAACCGAAGAAACGGAAGCATCGGAACTCCAGGGAGGAGCGTCCCCTCTGTTGGAGGACACCGTGAACGAGCTGCAGAGATTTGTCTTTGCAAACTTCAGGCTCTTTGAAGACAAGTTTACCGCACTTGACTATGCCAGCATCGGGGCCATGTCAAAAGAAGACTTCAAGGATATATTAGCCAATGTAGACTTCAATTTGACAGTCTCTCAGTTTGAGGCATTGTGGGATGCTCTACCCGTCAACGAGTTTGATAACTTGGACTACAGGGCATTCTTGGACCAGTACAGCGAGAGTGATAGTCCTGTGGATGATGGAAGATTTGATCTATCGCGACGACCAGCAACCGTCAATCCACTACAACTACCGTTGCGACCGACTACGACAGTACCTAGGGCGATGAGCAGATCGAGAATATTTTCAGGTCGTCGTACGGTCACACCTCTTGTCAATGCAGAGAGTACCGAGCAGATATTAAAGAGAGCTGTGATCAAGTACTGGCACGAGATTCGGAAATTATGCAAGTTACGAGATCCTGAAAACACAGGAGAGATTGAAATGCAGGAGTTTGCTGACATTCTACAGAACTTCAGCAGTCTTCCACCAGCTGAAGATTTTCAAAGATTGGCTATGAAGTATGATTTGAAAGAATCTGGAAAGTTTTCCTACATGGAGTTCCTGAAACATTTTGTTTTGAACCTCCGCCGACCAATCCGTGATGAGGAAGGCGGACCCAGAGCCCTCTTATCTCGGCAGAAGATACATCCAGCTAAAGTGCCATTCATCCATAAGGAAAGGAACACGGCAAAGACTAAACCATCAGTCAGTTTGAACAAGCGGGCCCCTACTCCAAACCCAATCACCGCAGCAGATATCTTGGTCATAGGGGACTCCATGATCAAGCGGCTACAACCTAGAAGATTGAGTAGGAACAAGAAAGTGATCTGTCATACGATGCGCGGGGCGAAGATCGAGCACATCGCTGCGAATGCCAAACAATTGTCGTCAAAGCACAATGTTTCTGGCATAATTCTTCATGTCGGAACCAATAACACCTTCGACAACCCGGAAACCATTGCTGCAAAGATCACTTCACTTGGTGAAACACTGCAACCAAGATCAGTTACGATTTCATCAATAATCCATCGTAACAATCAGTCAGTGTCCCAACGGAAGAAGGTAGATGATTCCAATGATCTGCTGAAATCTATCGCCAAGCGCAAGAATTGGAACTTCATTGACAACGGGAACATAAACCCAGAACACCTTGTATTGGATGGCGTGCACCTCAACACCACAGGAGTGCGCCTACTGGCCAAGAACATTATACAACACATCGCCGGAGCCGGACCATCAGAAAGCAGAAGTACACGCACACCTTCGCATGAAACTACGCCGCAGAGAGCACCCTTTGGCGACATCCTGTATTCTGATGCAGTCAGAAATCCAACTGCAACTCGCCCAGATGTTTCGACGGTTTTCCGGCCATCCAACCAATACTACCCACACTCACAGCCGAAGCGACGTCAACCATCCCGACGTCAACCACGACCCACCTCGGTATTCCAAACCAAGACATCCAACGCCCACCATCGAGACCAAGAATGGAACCAGTACCTAGACAAAGTCAGAGAACTACTAAACCCACAGAGCAGGATTCAAAAGTAA

Transcript

Paelopatides56579

ATGGTCGCAGCATCAGTCGTCGCCTTCCTACGCAAGCAGGGAATACCCCTCTTCATTTACCTCGACGACTGGCTTATTCTCGGCGAGACCGAAGCTCAAGCGATTTACAATGTCCATTTCACGGCCACAACACTACGTCGTCTAGGCTGGATCATCAATCTAGAGAAATCGAGCCTAGCTCCAGCCCACTCGATCGTTTACCTGGGCGCAGACCTCCAGTTCCAAACGGGAATCGCCCGGCCATCAAAAGAACGAGCAGACAGCCTAACCAAAGCCATCAGGCTGCTTCTCGACACGGACTCTTGCCAAGCGAAGCTCTGGCTACGAGCCATCGGCATCGTGGCGAGCTTTGCCGACCTCGTCAACTACTGCAGGCTCCGAATGAGACCTATCCAGTTCCATCTCTCAAGGCACTTCGACCCGACGAAGGACCTGATGACAAGGATGGTGCCCCTCACAGACCACGTGAAACCACACCTCCTTTGGTGGCAAGACTCGACCAACTGGGCGCAAGGCGTCCACTTCAACCCACAACGCCCATTAGCACTCTGGGCTCGATATGATTTCCATCACAGTGGAAGTGTGAACTACCAAGAGTTTTTACAGAAATTAGGAGTAGACATGGAAATTATACAACACTCTGCACCAGCAAACAGAGGAGGTGCAAGATTAGGACAGGACAGGACGAACAAAATAGCCATCATCAACAGAAGTGACGATCCCATCAGGGGAATGAATTATAGACAGATAGAAGCTGAACTAAGGAAAAGGTTACGAGATAACTACGTAAATTTGAAGAAAGCTTTCATGGCTTTTGATGCCAATAGGGACGGCTTTGTGACATTGGATGACCTAAAGAGTATCATCATACACTTCACCATTCCTGTATCGGATCAGTTATTTCAACAGCTTATGGAAAGAATCGGTTTCAAAGCTTCTCACAAGATTCCGTGGGAACATTTCCTGGATAAGTTTCAAGATCCACAGAGCATTGGGAATGGACAGACTATTCCAATTAGACCGTATAATTACAAGTGTAATCCGATTCGAGAAGCCGAAAGACCCTTCACGGTGAATGAGATTGTATCACTTCTCCAAAATCATGTCTCAGATATGTACCCATCCTTCAAGCAGGCTTTCTTGACCTTTGATGAGGTAGAATACAGTGTCTCTCATAGAGGAACAATTAACCGCGACGGTAAGATCACACGGAAAGAACTGAAGAAGATTTTGGATAAATTCACCATCCGTCTTAGTCCATCGCAATTCCAAGGACTGATGGAACATTTAGACCCAGAAAAGAATAATTCAATAGATTATCACACATTCCTGGATACTTTTGAACATAGAGAGACAAAGGAAGGACACAAGTGGTTGAACTCTGAACACAGATTTAATAACATAGCTCCAGCTAATTTGGCCTGGGATACCATCGAAGAGATTCTCTGTGAGAAGATCGAAGAATACTGGAAACCTATCTGCCAAAGCATAAGATCGGCTGATACGAAGGGAAGCGGTAACCTGAGTCATCAACAACTAAAAAAGATCTTAGCCAGACATGTCCTACCAGTATCGAATGAGCATTTTGACAAGTTATGGAACCAATGCCAGGAAACACCAGAAGGCAAAGTAAGAGTAGCTGAATTTTTTGGAAACCTTGGAGTTGATGCATCGCCTGGGGACTTGGTGGGGTTAAGTACTCAGATACATGTTTTCAGTGACCTTACAGAGCAACAGAGACAGGTAGACTTGGATTCAAGACTTCGACAAGTGCAACAGTTGGCACAACAGCAAACCAATCAGATGACTGCAGATGAAGTCTTGATCAGGCTCAAGGACAGGATGTCTCAGAAATCAAGCAGTACCAGAGACAACTTCCTCAGATATTGCAAGAACAGGACAGGAAAGTTATCCGGAAAGGAGTTCCGTCAGGTTCTAGATAGCTTTGGCATGTACATGAACGACGAGCACTTCAGAAAACTTTGCGACAAAGTAGGTTTCAGTCGAGGTCCTATGATGTACTCTGACTTCATCCAAGGATTTGAGGATCTAAGGACCAGAGGGCCTGGAGACGAGATCCAGAGGTACCCAAACCATTGGTACAAGGTCTTGGATGCAAAGACGATGTCATCACAGGAAGTAGCGACCGATCTGAAAGATAAACTGAGACAGACGTTTAGGAGTGAGAATTTAAGATCTGCATTCTACAAGATGGACGACGACCACGATGGCTTCGTCAAGCAGATAGACTTCAGACATCTGTTTGACCACATGATGATGATCATCGACAACGATGAATTCGCTAAAATTATGGACATCCTCGACATCGGGAAAAAGACAAAATTATCTTACTTAAATTTCCTCCATATATTTCAAGAGACGGACACATCCGAGGGTCATAAGTGGTTGGACTCTGACCACAGGTTTAACGATACTCTCGATCCAGCGCAAATGGCAGTCGAGCAAGTCCACGAGATCCTCGTTGCCAAGGCTCGGAGACACTACCACGATCTTGCCAAGGCATTCAGGTCTATCGACAAAAATGGGAACGGCGTGATCCAGAAAAAGGAACTCCGAGATCTCTTGTATACCTTCATGCTACCGATCACGAAAGAAGACTTCACTAAACTCTGGAATAAGTATGACTTGGAGGGCAAAGGATATATTGATCACCAGCATTTCCTAAAAGTGATGGGAAGATCCTTCGCGCCGAGTGACGCCGCCGGAATTAGCAGACGAATCGTTGACGAGTCCATGGACACCATAGAAAATCATCATCAAAAACAGCTGGAAAAACAAATCAACATCACTTTGAATCAAGCAAACAGTTCCAACTTCATCTCGGCCGATCGCCTCGAGCAATCTCTGAAGGACAAGATACGAGACAGATATGGAACATTCCAGGAAGCTTTCGCAAAAATAGATCAATCAAAGAGCGGTTTTATCTCGGTGAAAGATTTACAAAAGATCATGGTGGATCATAACTATCTAGTGGACGATACAACTTTGAAGCAATTGTTACATAGACTTGGACTACCTTCTGACAAGAGCAAGCTGTCCTACGAAAAATTTCTGAAGGCTTTTGATGAAGGTATGGAAGCTCAGTATTGCCAGAGGGATAGTGCAGACGTAGCGGTCAATTCTTTCAATCATCTCAAGGCCGATAAAGCAGCCAAGAAATTACGGAGGATAGTACAGGCCAACTTCGGCGTGCTTCAAGCGGCATTTGCGGCATTCGACAAAGAAAAAAAGGGCAGAGTCGGGCCTTCGGAATTCCGTCGAATCTTGGACAACTTTTGTTTCAAGCTTTCCGACAAGCAGTTTAAGTTTCTATTGACCAACGTTAAAGTGAACGAGGACCTCTCCATAAATTACCCAGCATTCCTAGAGGACTTCTCGGTCAACGAACATGAGCTGGCTCAGAATTGGATCGACTCTATTCAAACCGAAGAAACGGAAGCATCGGAACTCCAGGGAGGAGCGTCCCCTCTGTTGGAGGACACCGTGAACGAGCTGCAGAGATTTGTCTTTGCAAACTTCAGGCTCTTTGAAGACAAGTTTACCGCACTTGACTATGCCAGCATCGGGGCCATGTCAAAAGAAGACTTCAAGGATATATTAGCCAATGTAGACTTCAATTTGACAGTCTCTCAGTTTGAGGCATTGTGGGATGCTCTACCCGTCAACGAGTTTGATAACTTGGACTACAGGGCATTCTTGGACCAGTACAGCGAGAGTGATAGTCCTGTGGATGATGGAAGATTTGATCTATCGCGACGACCAGCAACCGTCAATCCACTACAACTACCGTTGCGACCGACTACGACAGTACCTAGGGCGATGAGCAGATCGAGAATATTTTCAGGTCGTCGTACGGTCACACCTCTTGTCAATGCAGAGAGTACCGAGCAGATATTAAAGAGAGCTGTGATCAAGTACTGGCACGAGATTCGGAAATTATGCAAGTTACGAGATCCTGAAAACACAGGAGAGATTGAAATGCAGGAGTTTGCTGACATTCTACAGAACTTCAGCAGTCTTCCACCAGCTGAAGATTTTCAAAGATTGGCTATGAAGTATGATTTGAAAGAATCTGGAAAGTTTTCCTACATGGAGTTCCTGAAACATTTTGTTTTGAACCTCCGCCGACCAATCCGTGATGAGGAAGGCGGACCCAGAGCCCTCTTATCTCGGCAGAAGATACATCCAGCTAAAGTGCCATTCATCCATAAGGAAAGGAACACGGCAAAGACTAAACCATCAGTCAGTTTGAACAAGCGGGCCCCTACTCCAAACCCAATCACCGCAGCAGATATCTTGGTCATAGGGGACTCCATGATCAAGCGGCTACAACCTAGAAGATTGAGTAGGAACAAGAAAGTGATCTGTCATACGATGCGCGGGGCGAAGATCGAGCACATCGCTGCGAATGCCAAACAATTGTCGTCAAAGCACAATGTTTCTGGCATAATTCTTCATGTCGGAACCAATAACACCTTCGACAACCCGGAAACCATTGCTGCAAAGATCACTTCACTTGGTGAAACACTGCAACCAAGATCAGTTACGATTTCATCAATAATCCATCGTAACAATCAGTCAGTGTCCCAACGGAAGAAGGTAGATGATTCCAATGATCTGCTGAAATCTATCGCCAAGCGCAAGAATTGGAACTTCATTGACAACGGGAACATAAACCCAGAACACCTTGTATTGGATGGCGTGCACCTCAACACCACAGGAGTGCGCCTACTGGCCAAGAACATTATACAACACATCGCCGGAGCCGGACCATCAGAAAGCAGAAGTACACGCACACCTTCGCATGAAACTACGCCGCAGAGAGCACCCTTTGGCGACATCCTGTATTCTGATGCAGTCAGAAATCCAACTGCAACTCGCCCAGATGTTTCGACGGTTTTCCGGCCATCCAACCAATACTACCCACACTCACAGCCGAAGCGACGTCAACCATCCCGACGTCAACCACGACCCACCTCGGTATTCCAAACCAAGACATCCAACGCCCACCATCGAGACCAAGAATGGAACCAGTACCTAGACAAAGTCAGAGAACTACTAAACCCACAGAGCAGGATTCAAAAGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08976	EF-hand_11	EF-hand domain	Domain	Interproscan
PF13202	EF-hand_5	EF hand	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan
PF13833	EF-hand_8	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR015070	Domain	DJBP, EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052603	Family	EF-hand calcium-binding domain-containing protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20875	EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-