Gene detail

Detailed information of Paelopatides55188 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides55188	BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1	utg57601	64842	81676	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Paelopatides55188

ACTTGATGTTGCATGCACTAGTACTGTCACACCCGTAGCGCTCGAACTCTCTTCTTTTTTTAGATCGACAATAACAATACACTAGTCAAACATTAACATTGGAAGTTGAATAAAAGGGTCTTTGCGAATGAATGCAATCATCATTTACTTCTTGAACTCGTGACGAACACCAATCGACATTTCTGGCAGCCCATATTATCAATACGATTTCCTAATCCTAAGTAACATCGGTCATCAGATCACTATCTCAACGAGTCTTGTTCTTAACTTCTTACTGTGCTGGTCAACATCTTGTGGTCAACATCTTGGATAAGAAATGGCCCCAACAAAGAAAGCAAATATTTTGGACCGTCTGAATAACGGTGAAGTAATCATTGGTGATGGAGGGTATGTCTTTGCAATGGAAAAGAGAGGCTACGTGAAGGCAGGCCCTTGGACCCCTGAAGCAACAGTTGAACATCCTGATGCAGTACGGCAACTTGCAAGGGAGTTCCTGAGAGCTGGATCTGATGTGATGCAGGCATTTACTTTTTATGCCAGTGATGATAAACTTCAAAACAGAGGCAATAAAGCCCAGGAGACTTATTCTGGAAGAAGAATTAACGATGCAGCTTGCAAGATTGCCAGAGAAGTGGCCAATGAGGGGGATGCGATGGTAGCAGGAGGGGTTTCTCAGACCCCCACATACTTGACCACACAGGATAAAGCCCTGGTCCAAAAAGAATTTAGGAAACAAATGGAGGTCTTTGTAGATAACAACGTTGACTTTATGATTGCAGAGTATTTTGAACACGTTGAAGAAGCAGTGTGGGCTGTAGAAGCCTTGAAGGAGTTTCATGTTACTGTTGCTGCTAACCTATGTATTGGACCAGAGGGTGACCTACATGGAGTATCCCCAGGAGACTGTGCTGTTCAGTTGGTCAATGCAGGTGCTGAAATTGTTGGAGTCAACTGCCATTTTGATCCCCCAACCTCCATTGAAACTGTCCGTTTGATGAAGGAAGGCCTCACTAAGGCTGGGTTGTCTGCTCACATGATGGTACAGCCTCTGGGTTTCATGACTCCAGACTGTGGAAGACAAGGTTTCATCGATTTACCAGAATTTCCATTTGGATTAGAACCGCGTATCATAACTAGATGGGACGCCCATAAATTCGCAAGAGATGCTTACGATGCCGGAATAAGATATATCGGAGGTTGCTGTGGCTTTGAGCCCTACCATATCAGAGCAGTAGCAGAAGAACTAGCTAAAGAGAGAGGATATAAACCAGCAGGCTCAGAGAAACATGATCCATGGGGACAAGGGCTGCTTTTACATACCAAACCATGGGTTAGGGCAAGGGCCCATCGCGAATACTGGGAGAACCTGAAACCTTCATCCGGAAGACCGTTCAGTGCTGCCCTCTCCGCTCCCAGTGCTTGGGGTGTGACGGCCGGAGACCAACTGTTAAAGCAGAAGACAGAAGAAACGACCACCGAAGAGTTTAAGAAACTTGCTCAACACTGCTGTCAAGGCAAGCAAAAGCAAACACCGGAGACCATCGTCGAGGTCCCAAGTCTTGTGGAGGACTGAAATCATTTAAAAGGAAAGAACTCTCTTGAAAACTTTTGAGAAATGAGAGTCTTTGCTCTTATTCCTCTTATTAACAGATGACCTAGTACAGAAGGCATGTGGGGAGCATATTCCGTGCATTTTATATTCATAGACACAAAAAAGGTTCTTCTTGATAGACTACTCTTGATTGTAAAATACTTTATCATTGATAAGTATCAACAAAAATATGTACATTGAAATCAATTTATACGATGATTGGAAGTTTTGCTTGTGATTTTGATGGATTTTTATAAGTTTCATAACATTTGAACTAAGCTATAGCAGTGTTTGTTTAAATATCATATTTATTTTTCTATCAAAATGTACGTTCTGGAATAAGACGATTCGATAGTCTGACCTACGGTTTACGACTAATATGTATTCTGTATCGTTTTGTCCTTTTAACAATTTGACGATGCCAATTAAGGAAATTATTAAATTGGATGGAATGCATTTTGGGATAATAGTATATTATGAAATCAGTCTAGTGACATGTGGAGATTGTTGGTGGTGAATTCCATCTTGGGTGACTTTGTGGTTGTAATTGGTTCTTCTGCCACACACACCATCCTCAATATGTAAGCATTATCACCTTCAGGAAAGAACTTTGGAAAATGGTTTTAGCAATTTTGAGCACATGATGGCAATGCAGATGACAAAGTATCTGTGGATGTAGGGATTTGTAAAGGTTAGGGGGGAGATTTCAAGATTTTCAATGGAACCTCTTTCCCATGAGGTAATTTGAGTTAATTTAGTTTATTGCATTACAAATCCCCCCCTGCCTAATCTGCTAATTACCTCATTCTCAATTTCATTTAATGCAATCCAGCAGTCAAAATAATGTATCGACTATGATGGTAAATAGTAATGGCTTGCTAGGAACATTTTATGCTGGTAGGTAATCTGTAATTAATGACATACTTTCAGTTGGTACTGTTTCAGCATTCCTAAGTTGTCAAGAGTTCAGATGTCATTTTCCTAGACCCCAAAATTCTCAGGTGTTTTTTAATTTTAGGTATAAAATCCGGTGTTAGTAAGCACCCAACACACAGCATGAAAACTGCTGGCTCCAATGGAAAATTCCCCTTATACCACCACCAGTTGCCCCAGGACCCTGCTGGGGGTCCTGTATCCACCCCAGGTTACAACTACACTGGAAGTTGTAGTGTCCTTAATTGTAAAACATCCTGCACAGATAATCGTAGATTATCCATTGATGGTTTTCATGCCAGATTCCATTCTTGACAAATTTGATCACCGATATTAATATTTATGATGTGATTTGATGTTGCTGTACAGTATCTTTTTCTTTCATTACTAAATTGTACATATGTTCATTAATAAATGTTTGGGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02574	S-methyl_trans	Homocysteine S-methyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003726	Domain	Homocysteine-binding domain	Interproscan
IPR017226	Family	Betaine-homocysteine S-methyltransferase, BHMT	Interproscan
IPR036589	Homologous_superfamily	Homocysteine-binding domain superfamily	Interproscan
IPR051524	Family	Betaine-homocysteine S-methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46120	BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0009086	Biological Process	methionine biosynthetic process	Interproscan
GO:0047150	Molecular Function	betaine-homocysteine S-methyltransferase activity	Interproscan
GO:0071267	Biological Process	L-methionine salvage	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-