Gene detail

Detailed information of Paelopatides52898 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides52898	B-CELL RECEPTOR CD22	utg48425	172503	188255	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides52898

ATGATACCATTAGTATTCATCATGATGTACCTACTAGAGGCTGATACTAAGCATATATCTGTGTCAAATGCGAGTAGGACAGGAAGTACTATACTGATGCATGGGTCTAACGTGACTATTATTTGCTCAAATGATACTCACGAACATTTCAACGGCTCTCAACGTCTAATCTGGTATTTTAATAACCGCATGCTTTCAGCCGGAGATGATGACGTTGCACCGGAAAATTTAGATAACATCCGAATACTAGAAGAAGGTCGCTTGTTTATTCATCATATTGATGTCATAAATGAGGGTCTTTACAATTGTACGTTGGGCAGTGACATAACAATAGGACTATTAAAGGTCTTTGTGGAAATTCGGCCAAACGTTTCAATGCTAGGCTTACCATCGCTTGGCAATCTCTCTACATCGAGAAGCTATGAAGTAGAATGTGTAGCGACAGGATCAAATCACAATGTAACATTTAGTTGGTTTGTGAACGAGGAGACATACCACAGTATAGAACGTATCACGATCAACAGTAGTACTATATTATATCAACCCAGGATAGATGACAAAAACCTGTCCTGTTTGACATTTGGACGGATTAATGAAAGTACAGTCGTAGTCGTCAAATATATACACGATGTTTTCGAGCAAGACGTATCTATAACCACTGTGTTGGTATGGTTCGGTAACAATATTACTCTCTGGTGTTACTCTCGACTGGATGTTATTTCTCTGGTTGGCTGGCATTATCCGGCTGAGACCGATGTCATTGTGACAACAGATAGAAGAAAGTTATACATTGAAAGTGTACGACAACATGATAAAGGATATTATACCTGCCTCAGAGGGGGAGACCAAATCGAATTTATTCGATTGGAAATAGTTCTTCCCGAGATGTCTATTATTCAGAGCAACAATGATAAAGCCTCTAATTCAAATGTGTTCTGGACAGAAACATTGTATTTAGAATGTAGAGCATTGTCTGTTGTGCCTCCATCCAATTTGTCTTGGCGGATAGGTAAACAGAGCATAATTGGTAGTACTTCAAGCACGAAGAACGCAATCTTTGCTGAAATATATGACTATTCAAGTACAATATTGTACGTGGCACCCACATACGACCATCACATAACATGTCTTTTGGAAACACTAAAGTATTCACGAAACATATCCCTTGCCATTTCAGTTAATGTGACTTCTACAGACATCGAGGAAAGAACCGTCAAATATGGTGAAACGATATCTCTGTCATGTGATTTGAAAACCAATAAAACCCATCTGTGGGAATTTAGTAAAACTAACGGCATCCCCGGTTACAATGTACCAATCACCTATAATGATATGAACAGTAGTCACGTGAATATCAATAATGTAAAGATGAAGAACCAGGGTTACTACAGATGTTGTCAACTGGACCAACCTACGAGTATTACCTTAATAACGGTCAATGTTGTACCTGAGATAGAAATGGCGTTTGGAGATAAGCCTCCAGAGAATGGCATCATGTATCGGTATAGACTTTATCGGTTACGGTGTACCATCATCGGTTCATTGTATCCAGTTAACATTTCATGGAGTGTTAATGGACTAAACGTAAATGAAAGCATCGAACATCTGCAACCTTCCGAAAGCACGAAGGGAGACGACCTTCGTGACGTTAGCAGCATATTCACCTACCACCCTAATCGGGAAGACCAGAATGTGTCTTGTTGGACACATCCCTCTGAAAAAGTAACCACTATGACTGAAACATTTGCCATTAAAGATGTTATTTCTGTGGACCCTGCTATCAAAATAAGATATACCACGTTCGATGGAGACATAACATTGTCGTGTCGTTACAATAGTTCTGTTGAGAAGCTACGATGGTCATTCCAAGCTGATAACAAAATAATATCATGTGTTATTAGACACTGTCCATTTGTTACAAATGTTCAGACGGAAGCTAAAGAAACCACATTATTACTTCGAAGAGTGACATTTATCAACGAGGGACGATATGTATGTCATCATGGACTTGAAGAAATAAAGTTTGTTGTCTTAACAATTACAGGTGAGTGA

Transcript

Paelopatides52898

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00047	ig	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013151	Domain	Immunoglobulin	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46958	B-CELL RECEPTOR CD22	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005769	Cellular Component	early endosome	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0030888	Biological Process	regulation of B cell proliferation	Interproscan
GO:0033691	Molecular Function	sialic acid binding	Interproscan
GO:0042113	Biological Process	B cell activation	Interproscan
GO:0042609	Molecular Function	CD4 receptor binding	Interproscan
GO:0050859	Biological Process	negative regulation of B cell receptor signaling pathway	Interproscan
GO:0055037	Cellular Component	recycling endosome	Interproscan
GO:0070062	Cellular Component	extracellular exosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-