| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| Paelopatides52439 | CNH DOMAIN CONTAINING | utg468540 | 57240 | 250216 | + |
| CDS | |||||
| Paelopatides52439 | |||||
| Transcript |
| Paelopatides52439 |
| Protein |
| Paelopatides52439 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00780 | CNH | CNH domain | Repeat | Interproscan |
| PF10366 | Vps39_1 | Vacuolar sorting protein 39 domain 1 | Repeat | Interproscan |
| PF10367 | Vps39_2 | Vacuolar sorting protein 39 domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR000547 | Repeat | Clathrin, heavy chain/VPS, 7-fold repeat | Interproscan |
| IPR001180 | Domain | Citron homology (CNH) domain | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019452 | Domain | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 | Interproscan |
| IPR019453 | Domain | Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 | Interproscan |
| IPR032914 | Family | Vam6/VPS39/TRAP1 family | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12894 | CNH DOMAIN CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0006914 | Biological Process | autophagy | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0034058 | Biological Process | endosomal vesicle fusion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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