Detailed information of Paelopatides51469 in Paelopatides sp. Yap Gene info
Gene IDAnnotationContigStartEndStrand
Paelopatides51469DNA2/NAM7 HELICASE FAMILYutg434351302849192+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09416UPF1_Zn_bindRNA helicase (UPF2 interacting domain)DomainInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF18141UPF1_1B_domRNA helicase UPF1, 1B domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR018999DomainRNA helicase UPF1, Cys/His rich zinc-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR040812DomainRNA helicase UPF1, 1B domainInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP