Gene detail

Detailed information of Paelopatides49885 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides49885	TUDOR DOMAIN CONTAINING PROTEIN	utg37637	150405	251429	+

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides49885

ATGCCTCAGTCTAAGGATTCGCAAATCAAGTCACCACAGACCGGTGGTACACCATGCACCGATGGCTCGAGGAGAGCAGAGGGTGTGCAAAAGCAAGTGAAATTTTCCACTGATTCAAAGAAGCAGAGGGGATCACGTGACAGTGGGAGGAGTGGAAGAAAACGTGACAGACCAGATAAAAAAGAATTTCAGGAGAGCAGCGAGGCATATAACCAAAATTCCACACCTGAAGACATGGCTTCAAGAGACAGAAAATGGGAACCTAACCACAACTTAGACAGTTGGGATCCAATGGCTGATGATTTCAAGTCTCCAGTCTTTAACAGTTACAATCGGCCATCTATAGAAGACTTAACAAGAGACTTCCATGGCCAGAACCAGAACCAGGCAAGGAGGAGCGATGCCTCGAGTGGTCTGCAACTCTATGTCACTGGCATCCCTATAAGTATGGATGAGAATGGACTGACAAATTTATTTAGCACAGCTGGTTCGGTTAAGAGGGTGAAAATATGTGTTGGCAAAACAGAGAGACCTGGGACGTACGGGTTTGTAACCATGAACAGCATCAAAGACGTACACCAGGCAATGAGAAAACTTGATGGTTATCGCATCACTGATGACATTTGTCTGGGGGTCAAGATTGCACACGTCAAACCAAGATTAGATCCCCAATATGGCATTCACGATGGCTACCACCAAGATAAGGGTTACAATGACAGAGGAGGTCGTCATCCATCAGGTGAAAGTAGAAATCAGGGCTACTACGAGGATGGTGAGGACGGTCCTTATTATGACAACATCGATGGTAAAGACCTCCACCGGAACGAAGATGATGATCGGGAGATCAAGATGGAGGGTTCTCGCGGGGAGTTATTAAAAGTACATTTCAGACGAAGCAATTCAAGGGAATATGATGGCAGTGATGATACTTATGAGCAGAGGAGGGAAAGGAGAGGTCAGAATAGCAGAAGAGGCCGAGGCAGCCACCATTCTACTAATGGGGGACGATCTTCCCAGGGCGACAATGGGTACTCAGAGGACAGTTACGAAGGAGAGATACTTGGCAGTGGTGGAAAGAACAAATCTAAGCACAGACAGGGAAAGAGGTCATCCTCTCCCGAGGATAATGAAAGTGGTATCGAGAAGCTTTTATCAAGCCCAGCAGGAGCTGCACAGCTTACCATCATACAACAACAACAACAAATGCTCTTGACTATGCAGCTAGCTGCTCTGAATCCTTTTCGAATTAACCTACCACAATCCATGGCCATGCAACCCGCTCTGCTTGGTGCGACTACTCTGGGTCTGTTGGCACCACAGCTGCAGCAGTCAAGAGCGAGTGTGCAGGACATAACTTCTGTACCACAGCTGCAGCAGTCAAGAGCGAGTGTGCAGGACATAACTTCTCCCAAGACACCTCCAAAGAGCAGCAAGTTCAAGAAGTCTGAGAAGCTGACCAACGGAAGACAAACGCTCGGCTCCAGCTCTGACGATCAACAGTCCTCTGGACAAGACATGGAAGATTTAATCCAGAAGGAGAAAAGTCAACTAGATAGACGTCAACCAGCTGAGAAGAAAGACCAAAAGAGATTGGATGACTCAAGGAATGATTCGGAAGAGATAGTCTCTACGAAAGGGGTGGAGGCATCCTCACCAGGATACCGCAAAGAAGCAAAAGAAAATATTGTCGAGAAGCAACAGGAAAGGAAAAAGGAAAAAATATCCGAAGCAAGAGTCTGCCTCAATTGTGACCGACCTGGTAAGAAGAGATGTTCAATTTGCCAGAGCCCTTACTGTTCTACTCAATGCCAACATGACCATTGGTCAAAGCATCAACATGATTGTAAGAAGATCAAAGCAGATACAATTGCCAAGGCAACCAAAGATAGCCCCATCCCCCCAAAGGACTCTAGTGATTCCCCAAGATTGCAGCAGCCGTATGATGGCATCGTGGTGTCTGCCAGAAATATCCCAAAAGTCAAACCAGAGAGAAAGGAAATGAAGGTTATAATTGCCTACTCACAGAGTCCCTCAAAGTTTTGGGTACAGCTTCCTTTGGAGAAGAATATTTCTGGTTACACTAAAATGCAAGAGCTTATGGACAAAACTTTCAGTGATCCTCAGATAAAATTCCTTCCTGTGATGACACCTCAGGTCGATCACATTTACGTTTGTCACCGTGAAAGTGATGGTATGTGGTATCGTTCCTTGATTCTGGCCAACCCCGTAGGAGATGAAGTGCATGTTCAGTATGTCGACTGGGGTGATGATGACATGGTCCCTTTGAAAAACATCCGTCAGCTGAATAAGGGCATGATCCAGTTACCATTACAGGCGAGTCTTTATTCAGGATTGCTGTGTACATTGAAAGGGATTACTGCCACAAGTGGTGAGTGGTCCAAGGATGTATGCGATCAGTTCTTTGGATTGGTGTCCGGCGAAGGTGATAAACAGCTTACAGTCAACTTCCTCCAACCTAAAGAAGGTGATAAAGAGGCTTACATTACTAAAATGTTGGATGATAATGGTCTCGATATCATTGGAGAGCTATTAAAGGCAGGAATTGCAAAGAAGGATGAGATCTCAAAGCCAAAAAGTATACTAACATCTCCCCAAAGCGTGAAACCCAAAGTTCAACCGTCCTCCCCTCAGGAAGTAAAGACAAAAGCTACCACCTCCCCGTCACCTCAGCCGGTAAAGATGAAAGCTACCCCACCCTCTCCCCAGCCAGTCCAGACCAAGCCAAAACTACCCACATCTATCTGGCAGACATTAAAAGAACATGATCGCATCGTCATTGAAGTTTCATGCATACTCAGCGGTGCAAAGTTTTATGCCTACTTGCATAAAAATGCAGTGGCTATGATAGAGCAACAGGAAAACATGCAGGCATTTTATCAGAACTCTAAGGCATCCCCCAATGATAGATATCGTACAGGAGACTTCATTGCCAGCCGTTACTCCGTTGATCAGAGTTGGTACCGGGCCAAAGTCGTTGACTGTAATTCTCAGAGTCGGACCATGAATGTCTTCTTCATAGACTATGGTGCAACAGAAGAACGGTCTCATGAGGAATGTAGGAAGCTTGAAGCACAGTTTAGCCAACTTGCCCCTCAGTGCATTACCATGGTCTTGGACGGCATCGCACACAAGGAAGGATTGCCAGACCTTGGAAAGAAGTTTCGTGACTGGGTGGAAGGAAAAAGTGAATGTCAAGCAGAAATAAAAAAAGTGGTTAAGGAGGGTATATTGTTTGTACAATTATGTTCCTCGAGTGACCCTCGGGATTGCCTCAACAAAAAACTTAAAGCAGATGGGTACTCCAAGCAGGTGTTTGGAGAGGCGATATCTTCTGCCTCTCGTCCCGGTCCTGGTGGAGACAAAAGGCCCACTACCAGTGGAAGAAGTCCTATCCGCGACATCCCATCAAATGATCCCATGTCCAAAGCTGACAACAGCATTGAAGAGAGGAATTCTATTGCCAGTGCTGCTAGTAGGATGGTCGGAGAATGCCATTTGGTAGCTGTGATGGCCATTGATAGTCTGGTCAAGTTCCGGGTGTGTCTTGTGAAGGATGAGAAGGAGATGACGACACTGCAAGCCCAGATGCAAACTCATTACGAGAACACTTCTCCTGGTTTTAGACCTAAAGTTGGACAAAAATGTGCTGCACAGTTTCAAAATGAGTGGTATCGTGCAGTGGTCAAGTCAAAACTGGAACCTGGAGATGACCGCTTTGATGTCTTCTACATAGATTACGGCAACAGCTGTGAAGTAACGGCAGATGAGTGCCGACCACTCTTACCCGAACACAACGTTCTACCACCGTTTTCTTATTGTTTCCAACTTGAAAATGTGAACGATAAAGATGGGGAACAATGCCAAAGTGAGTTTGAGGAGTGGCTCCGGACTGCCAGCATGCAAATCATGGTCAAGATCACCGGAGTCCGGGATGAAACAAGTCTGGTCCGGATTTGGAAAACTGATAATGAGGAGGATTGTTTTAACGATCTCATCGGTAAAGTACCGCCCAGGCCATCTCTGCCTCTTCACACCTCTGTGGGGACAGTGGAGGTAGACGATGTGCTTGACATTGTGATCCTAGGCGCACAGGAAAACCCCTACCTCTTCCACGCAGTGCCTCTCAGTCTTGCCCAAGAATTGACTAACTTGGAAAAGGAACTACAAGAAGAGTGCCAACACCATCAGCAAAAATTTGAACCTAAAGTCGGTCAACTCTGCTGTGCAAAATTTGATCATGGTGATTTTTATCGAGCTTTTGTGCAAAGTAGCTCAGGAAAGCAGGTACATGTGTTGTTTGTGGACTATGGGAATGATGCAACGGTAGACACAAGTGAATGTCAATCACTACCAAATATCTTTACCAGTGTGCCAATGGTTGCTCTTCGCTGTAGATTAGATGCAGTGGCTGTTATGAGTGAGGAGAAATTAAATGCCTTTAAGACCACTGTGAAGGAATGCAAGCTACGTGTGACTCGTAAGGACGGAGACGTGGTGGTGGGAGTCTTGTGGGCGACAGACCACCCAGAGGAATGCTTCAATGGTATTCCAAAGAAAGGTATCCCATCAGAACAAGTAGAACAACCGGCTTCCTCAGATAATAGAGACCAAACACCAAACAGGAAAGATGTTGCTTCTCCAAGGAAGCCAGCAGATGCACCGAGTGATGTCAGACAGTCAAATAACCATGGTAACACATCAATGTCTCCAAGCAAGAAAGAAATCCATCCTACGACGCCCTCACCAATACAAAAGACTCGTGCCTCACCACGTGATCAGGGAGAACTTAAAAGAAACCAACATCAGAATGCTAGCAAACCCCAAAATGCAGTGAGATCGGACAAATGCAGTGTTAATGACCCTCCCAAACCATTCATCAGAGCGTCGGATATTCCAAAATCATGCCCTCCACAGATTGGAAAACTGTTACCGGCCAGTTTAACTCACCTCGAATCACCAAGCGAGATGTACTTTCATTTGTATGTCATGGAGACCTTGAATATCCTGAACACCACCCTGAAGGACGAGAACTTTCAGAATCTCAAAGACACTTTAAAAGAATACCATCCTCAAGTTGGGGAACTTTGCATGGCATTCGTGACAGATCAGTGGTGCCGTGCAGAGGTGCTAGGAGCTTCGGGCGCACAGTTTAATCTATCGATCTTAGATTATGGATGTACCATTGACCTAAGCAGTGAGCACTTACGACCCGCCCAGCCAAACTTTCTAAAGAACAAGCTCGCTTGTGTGAAATGCTGCTTGTTTGGGATTCTACCAGTCGGCAAGAATACCTGGGCAGCTGATGCGGTCGATTTCACCAAGAAACAGCTGGAGGGTCCGCAGTCAGTCGTACAGCTCAAAGTGATGGATGTTGTGGATGATGTTTTTTTGGTGGAGATCTACGTCCAGTCAGAGAATGAACAACATGAAGCCCTCTCAGAAAAACTAATCACAAATGGTCTAGCCAAAGAAAAGCCAGGTTATTCAGGGCCGGTGGTATCGATTCCCCATCCTCTTGACAATGCAGAGCTACAGGTTGTTGTAGGTGGTGTTATCAATCCTGGAGACTTTTATTGTGAAATCGTTGACAAAGAAGGTGTTGAGCTGGTGAAGTATCTCATGACAGCTGTTACTGAGTTTGCAGAGAAGCAAGAGAGAGACCCTGATTTTAAGCCAACTGTCAATCAATTTTGCCTTGGTAAATTCAAAGTGGATGGGGGCTGGTATAGGGCCAGGATCTTGTCTGTTCACGGAGACCAGTTCAAAGTTCAGTACATTGATTTTGGGAATTATGACCAGATCTCAGCTGATGAAATGCTTCCTTTACCAGCCCAGTTTGTGGATACCTGTGCTCTAGCCTTTCCATGCTGCTTGACTGGTGTTGGTAAATCCACAAGGCAGACCTGGGAGACTGAATGGGATGGTAAAGTGGCAGAGGCATTTGTGCAGCTGACCCAGAGCTATCCCTTAAAAGCGAAGGTGGTGGGAACAAAGGATTACATCACAGAGGTCACCTTAACCACGTTGGATTCAGAAGAGGATATTGGAGAGAAACTCCTTGAGATGTTTAGTGACATTCCAGAAGACAACGTGAGAGATTCAAAGTCATTGGAGTCTCCTCCCAATCAAGAAAATGCTGCCCCCAATCTGACTGGTGCCACCAGTGCTGAAGAAGACCCTGTCATGTCTGAATTGGAACTTCTGAGAGCTGAGCTCGCAGCTAAGGACAGGGAAAATAAAGAACTGAAGATGATGTTGGAGAAGTAA

Transcript

Paelopatides49885

Protein

Paelopatides49885

MPQSKDSQIKSPQTGGTPCTDGSRRAEGVQKQVKFSTDSKKQRGSRDSGRSGRKRDRPDKKEFQESSEAYNQNSTPEDMASRDRKWEPNHNLDSWDPMADDFKSPVFNSYNRPSIEDLTRDFHGQNQNQARRSDASSGLQLYVTGIPISMDENGLTNLFSTAGSVKRVKICVGKTERPGTYGFVTMNSIKDVHQAMRKLDGYRITDDICLGVKIAHVKPRLDPQYGIHDGYHQDKGYNDRGGRHPSGESRNQGYYEDGEDGPYYDNIDGKDLHRNEDDDREIKMEGSRGELLKVHFRRSNSREYDGSDDTYEQRRERRGQNSRRGRGSHHSTNGGRSSQGDNGYSEDSYEGEILGSGGKNKSKHRQGKRSSSPEDNESGIEKLLSSPAGAAQLTIIQQQQQMLLTMQLAALNPFRINLPQSMAMQPALLGATTLGLLAPQLQQSRASVQDITSVPQLQQSRASVQDITSPKTPPKSSKFKKSEKLTNGRQTLGSSSDDQQSSGQDMEDLIQKEKSQLDRRQPAEKKDQKRLDDSRNDSEEIVSTKGVEASSPGYRKEAKENIVEKQQERKKEKISEARVCLNCDRPGKKRCSICQSPYCSTQCQHDHWSKHQHDCKKIKADTIAKATKDSPIPPKDSSDSPRLQQPYDGIVVSARNIPKVKPERKEMKVIIAYSQSPSKFWVQLPLEKNISGYTKMQELMDKTFSDPQIKFLPVMTPQVDHIYVCHRESDGMWYRSLILANPVGDEVHVQYVDWGDDDMVPLKNIRQLNKGMIQLPLQASLYSGLLCTLKGITATSGEWSKDVCDQFFGLVSGEGDKQLTVNFLQPKEGDKEAYITKMLDDNGLDIIGELLKAGIAKKDEISKPKSILTSPQSVKPKVQPSSPQEVKTKATTSPSPQPVKMKATPPSPQPVQTKPKLPTSIWQTLKEHDRIVIEVSCILSGAKFYAYLHKNAVAMIEQQENMQAFYQNSKASPNDRYRTGDFIASRYSVDQSWYRAKVVDCNSQSRTMNVFFIDYGATEERSHEECRKLEAQFSQLAPQCITMVLDGIAHKEGLPDLGKKFRDWVEGKSECQAEIKKVVKEGILFVQLCSSSDPRDCLNKKLKADGYSKQVFGEAISSASRPGPGGDKRPTTSGRSPIRDIPSNDPMSKADNSIEERNSIASAASRMVGECHLVAVMAIDSLVKFRVCLVKDEKEMTTLQAQMQTHYENTSPGFRPKVGQKCAAQFQNEWYRAVVKSKLEPGDDRFDVFYIDYGNSCEVTADECRPLLPEHNVLPPFSYCFQLENVNDKDGEQCQSEFEEWLRTASMQIMVKITGVRDETSLVRIWKTDNEEDCFNDLIGKVPPRPSLPLHTSVGTVEVDDVLDIVILGAQENPYLFHAVPLSLAQELTNLEKELQEECQHHQQKFEPKVGQLCCAKFDHGDFYRAFVQSSSGKQVHVLFVDYGNDATVDTSECQSLPNIFTSVPMVALRCRLDAVAVMSEEKLNAFKTTVKECKLRVTRKDGDVVVGVLWATDHPEECFNGIPKKGIPSEQVEQPASSDNRDQTPNRKDVASPRKPADAPSDVRQSNNHGNTSMSPSKKEIHPTTPSPIQKTRASPRDQGELKRNQHQNASKPQNAVRSDKCSVNDPPKPFIRASDIPKSCPPQIGKLLPASLTHLESPSEMYFHLYVMETLNILNTTLKDENFQNLKDTLKEYHPQVGELCMAFVTDQWCRAEVLGASGAQFNLSILDYGCTIDLSSEHLRPAQPNFLKNKLACVKCCLFGILPVGKNTWAADAVDFTKKQLEGPQSVVQLKVMDVVDDVFLVEIYVQSENEQHEALSEKLITNGLAKEKPGYSGPVVSIPHPLDNAELQVVVGGVINPGDFYCEIVDKEGVELVKYLMTAVTEFAEKQERDPDFKPTVNQFCLGKFKVDGGWYRARILSVHGDQFKVQYIDFGNYDQISADEMLPLPAQFVDTCALAFPCCLTGVGKSTRQTWETEWDGKVAEAFVQLTQSYPLKAKVVGTKDYITEVTLTTLDSEEDIGEKLLEMFSDIPEDNVRDSKSLESPPNQENAAPNLTGATSAEEDPVMSELELLRAELAAKDRENKELKMMLEK*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR002893	Domain	Zinc finger, MYND-type	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR050621	Family	Tudor domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0007283	Biological Process	spermatogenesis	Interproscan
GO:0030719	Biological Process	P granule organization	Interproscan
GO:0034587	Biological Process	piRNA processing	Interproscan
GO:0043186	Cellular Component	P granule	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-