Gene detail

Detailed information of Paelopatides46262 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides46262	PROTEIN CBG26694	utg27614	111825	123566	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides46262

ATGGAGGAATTTTGTAACTGCATACCTAGGGAGATTAGAACTCATCTTTCAGATAGGGGAATAGAGCAAATTGAAAAGGCTGCCATTGTAGCAGACGATTATGAGCTTGCTCACGTGAGTTCATTCGGTCAAGTTCAGTACCCCAGGTCTCCAAAAAGTTTTAAAAGAAGGGACAAATATGGGAGTTTGAGACGAGGCAATGAGTATGACACGAAGGGCGGTAGAGGAAATGACAGTTCCAGAAATATTCCTACGTGCAGCTATTGTCACAGAGTTGGCCATATATATGAAAATTGCTTTAAAAGGTTGAGAGAACTTGAAAAGCCAATGGCGTTTATTGCCAGTAAACCAGAACAAAAAATCAGATCCCAAACTCAGCCTAATTGTTCAAAAGAACATATTCAAACAAGTATATTTTCCAAAAGAAGTAAGACTTCTTGTAGCCAGATTGAGAAGATTAGGGCCGATCTCAAATTACATGGTTACGATCATTTTATTTCAATAGGTAATGTTGTAAGACCAGGTAGTAATGATTCCTCACAAATTACTATTTTGAGGGATACTGGTGCATCACGATCCTTAATGTTACGCAGTGTGCTTTCACCCAGTTATTGCTTAAATAACAGCACATTACATGTTTTAGTAAGGGGTATGGGAGAAGATACCGTGAAGGCTCCGCTCATTGACCTTCACCTAGAGTGCGAGTATACCTCTAGGGTAGTAGAGATAGGAGTTGTAGAAAAGTTGCCAGTTAATGGTGTAGACTTTCTATTAGGCAATGACATTGCTGGTGGTAGAGTCCATATTTCCCAGTCTATTCAGGTTTGTGGCCAACCGCAATTTAATGGGGAAACTGAACAGTTATCGGAAGAGTATCCTGGTATATTTCCAGCTTGTGTTACTACTCGTTCCATGGCCCATAATATATCTGAACTTCACAAAGGTGATGAGGATGAATGTTTCCAACTGGCAGGGACATTCTTTCAGAATCTAGATGATTTGTCTCTAGGAAATCATAAAGATAATCAAGCTAATAATGCTAAACCCATGAAACCGCTGGTTTTAGACCAGCAGAACTTGATTGTAAAGCAAAAAGCTGACGACCAAGTGAATGTTCTAGATTATGTGTCAGGTTTAAATGAAAGACTGCATAAAGCATGTAGTTTGGCAAAGGAAAATTTGAAAAAAAGTCAAACTCGAATGAAGAAGAGATTTGACAAGAATGCAAAAGAGAGAAATTTTCAGATTGGTGAGATGGTTCTAGTACTGCTTCCGATACATGGTGAGCCACTGAGAGCTCGGTTTTCTGGGCCTTATCGAATAGCAAGGAAAATCAGCAATGTAAATTACATTGTTGAAACTCCAGGACGGCGGAAAAGTACCCGTCTATGTCATGTTAACATGCTGAAACCATACCATCATAGAAATGAAAAGGTATGTGCGGTGTCAGTAGTACAACATACTGCTGTAAAAAAAATAGAAAAGGTGGAAATTGATTTGAAAACTACAAATAAGAATTCTGGGGTTCTTAACCAACTTGATAATAAATTGAGTCACTTACAGCTAAGGGAGAGGGAAGAAATGAAAGGCTTAATCTTTTTGTTTCCTTGTGTTTTTAAAGATAACCCAGGAAGAACAAATGTACTGTACCATGATGTTGATGTAGGGGATGCAAAGCCAATCAAACAACATCCATATAGGCTAAACCCTTGCAAACTGCAAGCGGTTCAGAAAGAAATACAGTATATGCTCGAAAATGACATAATTTCGCCTGGCTATAGCCCGTGGGCGTCGCCTATCATATTGGTTCCCAAAGAGGATGGTTCACAACGTCTATGTATTGATTATAGAAAAGTGAATATGGTAACCATTACTGATTCTTACCCAATACCACGTCTAGATGATTGTATCGATCGTATTGGAAATTCAAAGTTTGTGAGTAAATATGACTTGTTGAAAGGTTATTGGCAAGTGCCATTAACAGAAAGAGCTAAGCAGATTTCAACTTTTGTAACACCTGATGGTGTTTGGTCATGTAATGTAATGCCTTTTGGAATGAAAAATGCACCAAGTACGTTCACTCGTCTCATGAGCAAAGTTTGTAATGGATTAAAAGGTTGTGGTACATATATCGATGATGTCATTATATATTCTGATGATTGGCAATCTCACATGGAAAGAACAAAGGCTTTCTTTGAAAGACTTGCAAAGGCAAATTTAACTGTAAATCTAAGTAAGAGTGACATAGGAAAGGCTTCGGTGACATATCTGGGTCACGTTGTGGGCGGAGGAAAGGTGTTACCAAAATCTGCTAAGGTAGAAGCGATTAACAAATTTCCAGCTCCTTCTAATAAAAAGGAGCTCATGCGTTTTCATGCATTTTCTCCTCAACTTAGTGCTGGAGTAGGCAGAACCGGTACATATATCACAGTCGATGCCATGTTAGATATGGCCGAGGCTGAACAACAAATCAACGTGTACAAGTTTGTGAGTGAAATGCGACAAAGAAGAATTCAATCTGTTCAAGTCCAGGAACAGTATGAATTTATTTTTGACAGTTTGGTCAAACAGCTGTGTGTTGGAAGGACAATGATATCCGTTGAGTCATTCAGAGCTGAGCTCACTAGTCTGAAGAAGACCAACAAAAACACTGAGCATACATTGATCATGAACCAATTTAGGGTATCAATTTCATCTTTTTACCTGATTTAG

Transcript

Paelopatides46262

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-