Gene detail

Detailed information of Paelopatides41913 in Paelopatides sp. Yap Gene info

Gene ID	Annotation	Contig	Start	End	Strand
Paelopatides41913	SNF2/RAD54 HELICASE FAMILY	utg19827	227512	256913	-

Gene Structure

More details in Jbrowse Sequence

CDS

Paelopatides41913

ATGTCTTCTAGACCGCCATCAAATCAGGGGGGTATGATGGACCCCAATACCCCCATGGCAAATCAACAAATGGCAAACAATGCAATGCAGCAGGGACACAGTCCTATGGCAGCACCTAGCCCTGCTTCAATGAGTGGAGGTCATAGCTCAAGTCCAGCACCTTTAAGACCGGTACCTAGTCCAAGTCCTATGCATGCTGGCCCAAGTCCAGGTGGAATGCATGGCCATACCCCTAGCCAGAGTCCCATACATGGTTCAGGACCTAGCCCCAGTCCAATGCATGCCTCAGGGTCATCCCAAAGTCCAATGCCAATGTCTCAGAGTCCAGCTGCCATGCAGTTAGAGTCTAGTCCAGGAATGCAACATGGACCAGGTGTAGTTCAAGCTTCCATGGCAGATGGCAATGTCATGCACAATGCCAGCCACATGTCTAGTCCTCATAGACAGATGATGCACCAAGGTCAAATGCCCAACCAAGGGCCAGGAATGTCTCATAGCACGCCAATAGGAGGAAGTCAGGGGCCGATGCCTAACCAAGCTAACCCAATGCAACAGTTTCAGTCACCAATGGGCAGTAATCAGACTATGATGCATGCTGGAAGTAGAAACGCCATGCCTCATCCTAACCAAGGTGCCATGCCACCAAACCAAGGCTATATGGTTAACCAAGGAGGACATATTATCAGCACTCACAACCAAACTGCCATGCAACCAGGGACTATGCCAACACAGGGTGGGCCTAATAACCAGTCTGCGATGATGAATCCACCAAGTGGACCTCCGATGAGCGGTCACCATGGAATGATCCCATCCCAAAGTAACATGGGACCTCAGGCAGGTAACTACCACCAGGGACAGCCAAATTCTGGTTATCCTCCAAGTCAATACAACCAAGTCCCAATGGCTGCACAAGGGAGCATGCAGCAGAACCAACCGATGAACCAGCAGGGTGGTCCAATGCCAAACCAAGTATACATGCACGGACCTGGTGCTATGCCGTCCAGTCATGCTGGCCCTCAACCTACGCAAGGGGGGCAAGGTTACCCACAAGATGCCCCGGGGCACTATGGTCTGTTGCAAAGGGCATTGGACAGCATGCAGGAGAAAGGGTTACAGAATGATCCTCGTTACAGCCATCTCATGTACATGGCAAGCAGGGCCAAACCCTACCAGCAACAACAGCAGCAACCGCAGCAACAACAACAGCAGCAGCAGCAACAACCACAACAGCAAGGTACACCTCCCCAACCACAAGGGCCTGGAATGAATTCTACTCCAGCCCATAGTTCAGGCCCAGCAGCGATGGCCCAGGGTCCTCCAGGACCTACATCTGGCTCAGGCCCCAATCAAGGGCCACAACAAGGCAGTCATCAAGAGGGATTTGCAGGACCCACGGAAACATCTACAGGAGGAGGAGGGGCAGGAGCAGCGGCTGGATCAGGAGGAGCAGCAGCTCCACCACAAGCGTTCCAAGCAGTACCAAGTGCTGCTTCATCTTCCCCTGGTCCTAATCAAACCCAGAGACAACAGCCACCATTTGCCCACGGACAACTGCAGCAGTTGAAGGCTCAGATCCTGGTCTATAAACTCCTGGCCAGAAACCAGCCTCTGCCAGATAATTGGAGACATGTCATACAGTCAAGACCAATGTGGGGGCCAGGAGGTGCTCCTTTCTCTAAAACCATGGCAATGCCGAATCAATCATCACCAGGTCCCGCAGGTCCACCGGCCGCTGGTGGTCAATCCCAGTGGCCTCCATCACAGAGCCCCAGTCAAAGTGGTAACATGGTCCCCCACTCTCAGAAAGGAGCCCCTCCTGTAAAGCCACCAACAAGTACACCAGTGCCACATCCATCCCCACAGTACCAGAAAACACAGTCTAATATACCGACTGTAATGATGCTACAGCCGAAACAGAACAAACTGGTACCGGTGGAGAAACCAGAAGGGGTCGACCCAATCACAGCACTTAACGAAAGAGAAAATAGGATCGCATCTCGTATTGCATACCGAATCCAAGAATTGCAGGTTTTGCCTGGCAGCCTTCCAGAGGATTTGAAAGTGAAGGCCAATATAGAGCTGAAAGCATTGCGGCTATTGAATGTTCAGAAACAACTGCGGCAAGAAATTGTGAGTAGCATGCGAAGTGATACAACTTTGGAGACTGCCCTCAATTCCAAAGCTTACAAACGCAGCAAGAAGCAGACTCTGAGAGATGCTCGTATCACGGAGAAGTTGGAGAGACAGCAGAAGATGGAGCAAGAGAAGAAGAAGAAGCAAAAACATCAGGAATACTTGGGCAGAGTTCTTGCTCATGCTAAAGAGTTCAAGGAATACCATCGCACCATGCAGATGAAGATATCCAGATGTAACAAAGCTATCGTCGTGTACCACCAGAACACGGAGAGAGAACAAAAGAAAGAGAGCGAACGGATGGAGAAAGAAAGAATGAGGAGGCTCATGGCTGAAGATGAAGAGGGATACAGAAAGCTGATTGACGAGAAGAAGGACAAACGTCTTGCATTCCTACTGGGTCAGACAGACCAGTACATAGCCAGTCTTTCTAAATTGGTGAAGGAGCACCAGCTGCAAGTCCTCAAGAAGAAACAGGAGCGGAGAAAGAAGAAGAAGAAGAAGCCCTCGATGCCGGAAAGCGTCCTTGAAGCTCTGCAGGATGAGAGTAGCCAGCTTAGTGACATACCAGTTAAGGTGGTCAGTACACAGACGGGGCAGACACTCAGTGGTGAGGAGCTCCAAGGGCATCTCAGTTAG

Transcript

Paelopatides41913

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07529	HSA	HSA domain	Family	Interproscan
PF08880	QLQ	QLQ	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014012	Domain	Helicase/SANT-associated domain	Interproscan
IPR014978	Domain	Glutamine-Leucine-Glutamine, QLQ	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10799	SNF2/RAD54 HELICASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-